Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 AC018635.1-201ENST00000468292 1030 ntBASIC15.21■□□□□ 0.03
PTCD2Q8WV60 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 PTP4A1P2-201ENST00000546033 454 ntBASIC15.21■□□□□ 0.03
PTCD2Q8WV60 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 AP001063.1-201ENST00000568332 529 ntBASIC15.21■□□□□ 0.03
PTCD2Q8WV60 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 AC005785.2-201ENST00000624655 631 ntBASIC15.21■□□□□ 0.03
PTCD2Q8WV60 AL138960.2-201ENST00000625145 535 ntBASIC15.21■□□□□ 0.03
PTCD2Q8WV60 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PTCD2Q8WV60 PDIA3P1-201ENST00000471856 1510 ntBASIC15.21■□□□□ 0.03
PTCD2Q8WV60 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PTCD2Q8WV60 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTCD2Q8WV60 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.21■□□□□ 0.02
PTCD2Q8WV60 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTCD2Q8WV60 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.21■□□□□ 0.02
PTCD2Q8WV60 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
PTCD2Q8WV60 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PTCD2Q8WV60 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PTCD2Q8WV60 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PTCD2Q8WV60 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.21■□□□□ 0.02
PTCD2Q8WV60 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PTCD2Q8WV60 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 AC092933.1-201ENST00000393644 945 ntBASIC15.2■□□□□ 0.02
PTCD2Q8WV60 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 AC012441.1-201ENST00000446669 685 ntBASIC15.2■□□□□ 0.02
PTCD2Q8WV60 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 GNRHR2-203ENST00000581100 1187 ntBASIC15.2■□□□□ 0.02
PTCD2Q8WV60 AC244669.2-201ENST00000612320 853 ntBASIC15.2■□□□□ 0.02
PTCD2Q8WV60 AP005019.2-201ENST00000615104 511 ntBASIC15.2■□□□□ 0.02
PTCD2Q8WV60 AC069503.1-202ENST00000616576 642 ntBASIC15.2■□□□□ 0.02
PTCD2Q8WV60 AC006963.1-201ENST00000624003 1052 ntBASIC15.2■□□□□ 0.02
PTCD2Q8WV60 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
PTCD2Q8WV60 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms