Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 BCL2L12P1-201ENST00000508390 733 ntBASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 SEPHS2P1-201ENST00000511618 1162 ntBASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 AC010632.2-201ENST00000588369 1224 ntBASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 PGAM1P11-201ENST00000416729 680 ntBASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 CHCHD2P2-201ENST00000503744 321 ntBASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 BATF-202ENST00000555504 361 ntTSL 2 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 AC004554.1-201ENST00000422830 1468 ntBASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
VPS13DQ5THJ4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 PTGER4P2-201ENST00000328411 252 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 ERP29P1-201ENST00000442902 706 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 PTGER4P3-201ENST00000458150 252 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 RN7SKP155-201ENST00000516031 288 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 MED11-202ENST00000573708 802 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 CR392039.1-201ENST00000623217 204 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 GARS-210ENST00000627489 324 ntTSL 4 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC008894.3-201ENST00000624324 3103 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 RN7SL23P-201ENST00000484055 275 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 MIR5001-201ENST00000580185 100 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC011498.7-201ENST00000624986 2027 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 RN7SL147P-201ENST00000487345 298 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AL049840.2-201ENST00000602722 535 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AL021707.6-201ENST00000609212 491 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC113385.2-201ENST00000614465 762 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 LINC00115-201ENST00000473798 1317 ntBASIC9.61□□□□□ -0.87
VPS13DQ5THJ4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms