Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC005777.1-201ENST00000588332 187 ntBASIC8.82□□□□□ -1
HSPG2P98160 AC090386.2-201ENST00000623010 1039 ntBASIC8.82□□□□□ -1
HSPG2P98160 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC8.82□□□□□ -1
HSPG2P98160 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
HSPG2P98160 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC8.82□□□□□ -1
HSPG2P98160 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC8.82□□□□□ -1
HSPG2P98160 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC8.82□□□□□ -1
HSPG2P98160 AL031590.1-202ENST00000641466 1737 ntBASIC8.82□□□□□ -1
HSPG2P98160 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC8.82□□□□□ -1
HSPG2P98160 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC8.82□□□□□ -1
HSPG2P98160 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC8.82□□□□□ -1
HSPG2P98160 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC8.82□□□□□ -1
HSPG2P98160 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC8.82□□□□□ -1
HSPG2P98160 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC8.82□□□□□ -1
HSPG2P98160 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC8.82□□□□□ -1
HSPG2P98160 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC8.82□□□□□ -1
HSPG2P98160 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC8.82□□□□□ -1
HSPG2P98160 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC8.82□□□□□ -1
HSPG2P98160 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 GUCY2EP-203ENST00000531117 1918 ntBASIC8.82□□□□□ -1
HSPG2P98160 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 AL590399.1-204ENST00000430302 781 ntTSL 5 BASIC8.82□□□□□ -1
HSPG2P98160 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC8.82□□□□□ -1
HSPG2P98160 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC8.82□□□□□ -1
HSPG2P98160 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC8.82□□□□□ -1
HSPG2P98160 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC8.82□□□□□ -1
HSPG2P98160 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC8.82□□□□□ -1
HSPG2P98160 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC8.82□□□□□ -1
HSPG2P98160 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC8.82□□□□□ -1
HSPG2P98160 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC8.82□□□□□ -1
HSPG2P98160 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC8.82□□□□□ -1
HSPG2P98160 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC8.82□□□□□ -1
HSPG2P98160 PRR20FP-201ENST00000603320 180 ntBASIC8.82□□□□□ -1
HSPG2P98160 AL359091.4-201ENST00000610052 409 ntBASIC8.82□□□□□ -1
HSPG2P98160 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC8.82□□□□□ -1
HSPG2P98160 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC8.82□□□□□ -1
HSPG2P98160 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
HSPG2P98160 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC8.81□□□□□ -1
HSPG2P98160 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC8.81□□□□□ -1
HSPG2P98160 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC8.81□□□□□ -1
HSPG2P98160 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC8.81□□□□□ -1
HSPG2P98160 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC8.81□□□□□ -1
HSPG2P98160 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 AC131235.2-201ENST00000445553 1057 ntBASIC8.81□□□□□ -1
HSPG2P98160 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC8.81□□□□□ -1
HSPG2P98160 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC8.81□□□□□ -1
HSPG2P98160 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC8.81□□□□□ -1
HSPG2P98160 GRAMD4P6-201ENST00000556999 244 ntBASIC8.81□□□□□ -1
HSPG2P98160 RN7SL202P-201ENST00000584410 262 ntBASIC8.81□□□□□ -1
HSPG2P98160 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC8.81□□□□□ -1
HSPG2P98160 AC092135.3-201ENST00000624151 1846 ntBASIC8.81□□□□□ -1
HSPG2P98160 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC8.81□□□□□ -1
HSPG2P98160 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC8.81□□□□□ -1
HSPG2P98160 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
HSPG2P98160 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 FTH1P18-201ENST00000412071 549 ntBASIC8.81□□□□□ -1
HSPG2P98160 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC8.81□□□□□ -1
HSPG2P98160 RPSAP6-201ENST00000417882 882 ntBASIC8.81□□□□□ -1
HSPG2P98160 AC004910.1-201ENST00000433493 787 ntBASIC8.81□□□□□ -1
HSPG2P98160 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC8.81□□□□□ -1
HSPG2P98160 RNF7-205ENST00000480908 782 ntTSL 4 BASIC8.81□□□□□ -1
HSPG2P98160 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC8.81□□□□□ -1
HSPG2P98160 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC8.81□□□□□ -1
HSPG2P98160 CCND3P2-201ENST00000579393 537 ntBASIC8.81□□□□□ -1
HSPG2P98160 MIR4459-201ENST00000581837 66 ntBASIC8.81□□□□□ -1
HSPG2P98160 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC8.81□□□□□ -1
HSPG2P98160 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC8.81□□□□□ -1
HSPG2P98160 AC079331.1-201ENST00000623200 1200 ntBASIC8.81□□□□□ -1
HSPG2P98160 NKILA-202ENST00000614771 2598 ntBASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms