Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN2P57739 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLDN2P57739 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.63□□□□□ -0.07
CLDN2P57739 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN2P57739 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN2P57739 FAM90A7P-201ENST00000382628 1395 ntBASIC14.62□□□□□ -0.07
CLDN2P57739 FAM90A23P-201ENST00000400136 1395 ntBASIC14.62□□□□□ -0.07
CLDN2P57739 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CLDN2P57739 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CLDN2P57739 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CLDN2P57739 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 AC091046.1-201ENST00000331871 207 ntBASIC14.62□□□□□ -0.07
CLDN2P57739 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.62□□□□□ -0.07
CLDN2P57739 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CLDN2P57739 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN2P57739 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.62□□□□□ -0.07
CLDN2P57739 RCC2P8-201ENST00000502779 1035 ntBASIC14.62□□□□□ -0.07
CLDN2P57739 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.62□□□□□ -0.07
CLDN2P57739 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.62□□□□□ -0.07
CLDN2P57739 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.62□□□□□ -0.07
CLDN2P57739 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN2P57739 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.62□□□□□ -0.07
CLDN2P57739 AC015967.2-201ENST00000624092 234 ntBASIC14.62□□□□□ -0.07
CLDN2P57739 AC006435.4-201ENST00000625037 234 ntBASIC14.62□□□□□ -0.07
CLDN2P57739 AL356737.1-201ENST00000634391 234 ntBASIC14.62□□□□□ -0.07
CLDN2P57739 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.62□□□□□ -0.07
CLDN2P57739 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.62□□□□□ -0.07
CLDN2P57739 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CLDN2P57739 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CLDN2P57739 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLDN2P57739 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CLDN2P57739 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN2P57739 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN2P57739 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 RN7SKP214-201ENST00000364208 315 ntBASIC14.61□□□□□ -0.07
CLDN2P57739 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN2P57739 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.61□□□□□ -0.07
CLDN2P57739 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.61□□□□□ -0.07
CLDN2P57739 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.61□□□□□ -0.07
CLDN2P57739 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 AC009779.1-201ENST00000551138 283 ntBASIC14.61□□□□□ -0.07
CLDN2P57739 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.61□□□□□ -0.07
CLDN2P57739 AC023824.1-201ENST00000562945 2975 ntBASIC14.61□□□□□ -0.07
CLDN2P57739 AL132994.2-201ENST00000603120 687 ntBASIC14.61□□□□□ -0.07
CLDN2P57739 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.61□□□□□ -0.07
CLDN2P57739 AF254983.2-201ENST00000612331 135 ntBASIC14.61□□□□□ -0.07
CLDN2P57739 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.61□□□□□ -0.07
CLDN2P57739 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLDN2P57739 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms