Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.9□□□□□ -0.18
EFNA3P52797 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.9□□□□□ -0.18
EFNA3P52797 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
EFNA3P52797 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
EFNA3P52797 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
EFNA3P52797 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
EFNA3P52797 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
EFNA3P52797 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.89□□□□□ -0.19
EFNA3P52797 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.89□□□□□ -0.19
EFNA3P52797 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
EFNA3P52797 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
EFNA3P52797 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
EFNA3P52797 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.89□□□□□ -0.19
EFNA3P52797 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.89□□□□□ -0.19
EFNA3P52797 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.89□□□□□ -0.19
EFNA3P52797 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
EFNA3P52797 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.89□□□□□ -0.19
EFNA3P52797 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.89□□□□□ -0.19
EFNA3P52797 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.89□□□□□ -0.19
EFNA3P52797 AC004898.1-201ENST00000451057 766 ntBASIC13.89□□□□□ -0.19
EFNA3P52797 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.89□□□□□ -0.19
EFNA3P52797 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.89□□□□□ -0.19
EFNA3P52797 ALG3P1-201ENST00000508806 1114 ntBASIC13.89□□□□□ -0.19
EFNA3P52797 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.89□□□□□ -0.19
EFNA3P52797 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.89□□□□□ -0.19
EFNA3P52797 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.89□□□□□ -0.19
EFNA3P52797 AC132192.2-201ENST00000596206 1147 ntBASIC13.89□□□□□ -0.19
EFNA3P52797 AC007663.3-201ENST00000609632 465 ntBASIC13.89□□□□□ -0.19
EFNA3P52797 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.89□□□□□ -0.19
EFNA3P52797 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.89□□□□□ -0.19
EFNA3P52797 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.89□□□□□ -0.19
EFNA3P52797 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
EFNA3P52797 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
EFNA3P52797 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
EFNA3P52797 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.89□□□□□ -0.19
EFNA3P52797 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.89□□□□□ -0.19
EFNA3P52797 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
EFNA3P52797 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
EFNA3P52797 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.88□□□□□ -0.19
EFNA3P52797 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.88□□□□□ -0.19
EFNA3P52797 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.88□□□□□ -0.19
EFNA3P52797 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.88□□□□□ -0.19
EFNA3P52797 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.88□□□□□ -0.19
EFNA3P52797 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.88□□□□□ -0.19
EFNA3P52797 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
EFNA3P52797 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
EFNA3P52797 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.88□□□□□ -0.19
EFNA3P52797 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.88□□□□□ -0.19
EFNA3P52797 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.88□□□□□ -0.19
EFNA3P52797 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
EFNA3P52797 CICP12-201ENST00000455801 843 ntBASIC13.88□□□□□ -0.19
EFNA3P52797 KRT8P13-201ENST00000463294 1010 ntBASIC13.88□□□□□ -0.19
EFNA3P52797 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.88□□□□□ -0.19
EFNA3P52797 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
EFNA3P52797 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms