Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 AC015936.2-201ENST00000593177 259 ntBASIC13.36□□□□□ -0.27
HLA-DOBP13765 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 AC105233.6-201ENST00000642093 218 ntBASIC13.36□□□□□ -0.27
HLA-DOBP13765 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
HLA-DOBP13765 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 AL138725.1-201ENST00000407347 1314 ntBASIC13.36□□□□□ -0.27
HLA-DOBP13765 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
HLA-DOBP13765 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 AC092933.1-201ENST00000393644 945 ntBASIC13.35□□□□□ -0.27
HLA-DOBP13765 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 COX20P2-201ENST00000452636 358 ntBASIC13.35□□□□□ -0.27
HLA-DOBP13765 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 AC025279.2-201ENST00000569730 653 ntBASIC13.35□□□□□ -0.27
HLA-DOBP13765 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 AL358472.5-202ENST00000641448 1267 ntBASIC13.35□□□□□ -0.27
HLA-DOBP13765 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-DOBP13765 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-DOBP13765 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.34□□□□□ -0.27
HLA-DOBP13765 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.34□□□□□ -0.27
HLA-DOBP13765 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 TLE1P1-201ENST00000422965 589 ntBASIC13.34□□□□□ -0.27
HLA-DOBP13765 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 AL590640.2-201ENST00000457038 527 ntBASIC13.34□□□□□ -0.27
HLA-DOBP13765 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-DOBP13765 FTH1P14-201ENST00000482930 551 ntBASIC13.34□□□□□ -0.27
HLA-DOBP13765 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.34□□□□□ -0.27
HLA-DOBP13765 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms