Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.71■□□□□ 0.11
RTN3O95197 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
RTN3O95197 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RTN3O95197 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 RN7SKP230-201ENST00000365642 335 ntBASIC15.71■□□□□ 0.11
RTN3O95197 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 HSPB1P2-201ENST00000448722 546 ntBASIC15.71■□□□□ 0.11
RTN3O95197 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.71■□□□□ 0.11
RTN3O95197 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.71■□□□□ 0.11
RTN3O95197 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
RTN3O95197 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.71■□□□□ 0.11
RTN3O95197 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.71■□□□□ 0.11
RTN3O95197 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.71■□□□□ 0.11
RTN3O95197 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.71■□□□□ 0.11
RTN3O95197 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RTN3O95197 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.71■□□□□ 0.11
RTN3O95197 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RTN3O95197 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.71■□□□□ 0.11
RTN3O95197 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.71■□□□□ 0.11
RTN3O95197 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RTN3O95197 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RTN3O95197 AC003102.2-201ENST00000589195 1469 ntBASIC15.71■□□□□ 0.1
RTN3O95197 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RTN3O95197 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RTN3O95197 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RTN3O95197 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.71■□□□□ 0.1
RTN3O95197 AC006486.2-201ENST00000624246 2199 ntBASIC15.7■□□□□ 0.1
RTN3O95197 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RTN3O95197 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 PID1-202ENST00000392054 2745 ntTSL 2 BASIC15.7■□□□□ 0.1
RTN3O95197 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.7■□□□□ 0.1
RTN3O95197 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RTN3O95197 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RTN3O95197 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 MIR663B-201ENST00000408361 115 ntBASIC15.7■□□□□ 0.1
RTN3O95197 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.7■□□□□ 0.1
RTN3O95197 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RTN3O95197 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.7■□□□□ 0.1
RTN3O95197 MIR4683-201ENST00000579659 81 ntBASIC15.7■□□□□ 0.1
RTN3O95197 AC104982.3-201ENST00000581995 514 ntBASIC15.7■□□□□ 0.1
RTN3O95197 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.7■□□□□ 0.1
RTN3O95197 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.7■□□□□ 0.1
RTN3O95197 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.7■□□□□ 0.1
RTN3O95197 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.7■□□□□ 0.1
RTN3O95197 AC005695.3-201ENST00000614522 232 ntBASIC15.7■□□□□ 0.1
RTN3O95197 AL096828.3-201ENST00000615354 462 ntBASIC15.7■□□□□ 0.1
RTN3O95197 AP001002.3-201ENST00000623482 206 ntBASIC15.7■□□□□ 0.1
RTN3O95197 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.7■□□□□ 0.1
RTN3O95197 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.7■□□□□ 0.1
RTN3O95197 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.7■□□□□ 0.1
RTN3O95197 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.7■□□□□ 0.1
RTN3O95197 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.7■□□□□ 0.1
RTN3O95197 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
RTN3O95197 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RTN3O95197 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RTN3O95197 SALL4P5-201ENST00000419001 1760 ntBASIC15.7■□□□□ 0.1
RTN3O95197 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.7■□□□□ 0.1
RTN3O95197 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
RTN3O95197 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RTN3O95197 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
RTN3O95197 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.69■□□□□ 0.1
RTN3O95197 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
RTN3O95197 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RTN3O95197 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms