Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
MSI1O43347 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
MSI1O43347 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.42■□□□□ 0.06
MSI1O43347 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MSI1O43347 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.42■□□□□ 0.06
MSI1O43347 MIR663B-201ENST00000408361 115 ntBASIC15.42■□□□□ 0.06
MSI1O43347 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
MSI1O43347 PFN1P12-201ENST00000455938 534 ntBASIC15.42■□□□□ 0.06
MSI1O43347 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.42■□□□□ 0.06
MSI1O43347 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.42■□□□□ 0.06
MSI1O43347 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.42■□□□□ 0.06
MSI1O43347 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.42■□□□□ 0.06
MSI1O43347 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.42■□□□□ 0.06
MSI1O43347 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MSI1O43347 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.42■□□□□ 0.06
MSI1O43347 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.42■□□□□ 0.06
MSI1O43347 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MSI1O43347 AL118558.3-201ENST00000607414 1079 ntBASIC15.42■□□□□ 0.06
MSI1O43347 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.42■□□□□ 0.06
MSI1O43347 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MSI1O43347 AC092135.3-201ENST00000624151 1846 ntBASIC15.42■□□□□ 0.06
MSI1O43347 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MSI1O43347 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MSI1O43347 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.42■□□□□ 0.06
MSI1O43347 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
MSI1O43347 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
MSI1O43347 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
MSI1O43347 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
MSI1O43347 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
MSI1O43347 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.41■□□□□ 0.06
MSI1O43347 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.41■□□□□ 0.06
MSI1O43347 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
MSI1O43347 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 AC010141.1-201ENST00000411585 623 ntBASIC15.41■□□□□ 0.06
MSI1O43347 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.41■□□□□ 0.06
MSI1O43347 AL354877.1-201ENST00000424412 413 ntBASIC15.41■□□□□ 0.06
MSI1O43347 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.41■□□□□ 0.06
MSI1O43347 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.41■□□□□ 0.06
MSI1O43347 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.41■□□□□ 0.06
MSI1O43347 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.41■□□□□ 0.06
MSI1O43347 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.41■□□□□ 0.06
MSI1O43347 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.41■□□□□ 0.06
MSI1O43347 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.41■□□□□ 0.06
MSI1O43347 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
MSI1O43347 MIR4525-201ENST00000580000 75 ntBASIC15.41■□□□□ 0.06
MSI1O43347 AC243960.2-201ENST00000600996 747 ntBASIC15.41■□□□□ 0.06
MSI1O43347 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.41■□□□□ 0.06
MSI1O43347 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.41■□□□□ 0.06
MSI1O43347 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.41■□□□□ 0.06
MSI1O43347 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
MSI1O43347 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 MRPL37P1-201ENST00000592451 1337 ntBASIC15.41■□□□□ 0.06
MSI1O43347 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MSI1O43347 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
MSI1O43347 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSI1O43347 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSI1O43347 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSI1O43347 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSI1O43347 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.4■□□□□ 0.06
MSI1O43347 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.4■□□□□ 0.06
MSI1O43347 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MSI1O43347 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSI1O43347 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSI1O43347 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MSI1O43347 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MSI1O43347 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
MSI1O43347 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.4■□□□□ 0.06
MSI1O43347 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSI1O43347 PUDPP3-201ENST00000445368 636 ntBASIC15.4■□□□□ 0.06
MSI1O43347 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.4■□□□□ 0.06
MSI1O43347 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.4■□□□□ 0.06
MSI1O43347 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC15.4■□□□□ 0.06
MSI1O43347 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MSI1O43347 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.4■□□□□ 0.06
MSI1O43347 AC009955.4-201ENST00000597192 544 ntBASIC15.4■□□□□ 0.06
MSI1O43347 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.4■□□□□ 0.06
MSI1O43347 BX088702.1-201ENST00000610784 235 ntBASIC15.4■□□□□ 0.06
MSI1O43347 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms