Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 RN7SL713P-201ENST00000582127 302 ntBASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A3BPQ9Y5P4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
COL4A3BPQ9Y5P4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 AC005089.1-201ENST00000619486 2241 ntBASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 MIR326-201ENST00000362220 95 ntBASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 GOLGA2P4-201ENST00000441462 777 ntBASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 EEF1DP1-201ENST00000585891 896 ntBASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 AC073413.1-201ENST00000603927 732 ntBASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 MIR6869-201ENST00000619434 62 ntBASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 INTS4P1-203ENST00000641008 3683 ntBASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
COL4A3BPQ9Y5P4 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 AC108725.1-201ENST00000495472 409 ntBASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 MIR4525-201ENST00000580000 75 ntBASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 AC091271.1-201ENST00000611877 1162 ntBASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.63■□□□□ 0.25
COL4A3BPQ9Y5P4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms