Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 AC026434.2-201ENST00000506094 1078 ntBASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 AL138828.2-201ENST00000615812 383 ntBASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 TUBB8P4-201ENST00000511806 1324 ntBASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
GABARAPL3Q9BY60 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 AL139094.1-201ENST00000405549 1188 ntBASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 FDX1P1-201ENST00000449115 551 ntBASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 AC131206.1-201ENST00000538078 1211 ntBASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
GABARAPL3Q9BY60 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
GABARAPL3Q9BY60 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GABARAPL3Q9BY60 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GABARAPL3Q9BY60 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms