Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 AC136759.1-202ENST00000530858 2194 ntBASIC16.76■□□□□ 0.27
TNFRSF25Q93038 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
TNFRSF25Q93038 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 HSPB1P2-201ENST00000448722 546 ntBASIC16.75■□□□□ 0.27
TNFRSF25Q93038 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 RPSAP36-202ENST00000494591 1261 ntBASIC16.75■□□□□ 0.27
TNFRSF25Q93038 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 AL583810.1-201ENST00000553344 1045 ntBASIC16.75■□□□□ 0.27
TNFRSF25Q93038 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 AC015656.1-201ENST00000624209 3578 ntBASIC16.75■□□□□ 0.27
TNFRSF25Q93038 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TNFRSF25Q93038 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 AL161932.2-201ENST00000435436 679 ntBASIC16.74■□□□□ 0.27
TNFRSF25Q93038 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 FAM86HP-204ENST00000513466 959 ntBASIC16.74■□□□□ 0.27
TNFRSF25Q93038 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 AC104506.1-201ENST00000609247 429 ntBASIC16.74■□□□□ 0.27
TNFRSF25Q93038 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 AC068418.2-201ENST00000577309 3703 ntBASIC16.74■□□□□ 0.27
TNFRSF25Q93038 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TNFRSF25Q93038 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms