Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 AC236430.1-201ENST00000402231 743 ntBASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 FO393414.2-201ENST00000405153 598 ntBASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 AC002472.2-201ENST00000442739 958 ntBASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 RN7SL618P-201ENST00000477850 296 ntBASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 AC004890.2-204ENST00000481968 304 ntBASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 TEX28P1-201ENST00000613479 1221 ntBASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 TEX28P2-201ENST00000617764 1221 ntBASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 MIR6069-201ENST00000620069 79 ntBASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 AC008761.3-201ENST00000624803 892 ntBASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DEPDC4Q8N2C3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 AC104457.1-201ENST00000401024 814 ntBASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 AC015910.1-201ENST00000579400 975 ntBASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
DEPDC4Q8N2C3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms