Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CCDC27Q2M243 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCDC27Q2M243 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC27Q2M243 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC27Q2M243 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC27Q2M243 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC27Q2M243 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC27Q2M243 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 AC005089.1-201ENST00000619486 2241 ntBASIC19.23■□□□□ 0.67
CCDC27Q2M243 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC27Q2M243 GSN-209ENST00000449733 2702 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC27Q2M243 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 GAS5-209ENST00000430245 723 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 RPS2P32-201ENST00000439199 892 ntBASIC19.23■□□□□ 0.67
CCDC27Q2M243 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 RPL13AP20-201ENST00000459725 609 ntBASIC19.23■□□□□ 0.67
CCDC27Q2M243 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 MIR6720-201ENST00000611664 98 ntBASIC19.23■□□□□ 0.67
CCDC27Q2M243 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 TMBIM7P-202ENST00000641474 1516 ntBASIC19.23■□□□□ 0.67
CCDC27Q2M243 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC27Q2M243 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC27Q2M243 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCDC27Q2M243 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC27Q2M243 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 ADK-205ENST00000539909 1866 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC27Q2M243 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC27Q2M243 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC27Q2M243 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 MTX1P1-201ENST00000440904 838 ntBASIC19.22■□□□□ 0.67
CCDC27Q2M243 KLF2P1-201ENST00000447438 1042 ntBASIC19.22■□□□□ 0.67
CCDC27Q2M243 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC27Q2M243 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC27Q2M243 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC27Q2M243 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC27Q2M243 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC27Q2M243 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC27Q2M243 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC27Q2M243 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC27Q2M243 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC27Q2M243 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC27Q2M243 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC27Q2M243 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC27Q2M243 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC27Q2M243 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 AL591846.1-201ENST00000451736 433 ntBASIC19.21■□□□□ 0.67
CCDC27Q2M243 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC27Q2M243 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms