Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 AC087499.6-201ENST00000411576 835 ntBASIC14.39□□□□□ -0.11
HMGCS1Q01581 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.39□□□□□ -0.11
HMGCS1Q01581 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 GIMAP3P-201ENST00000495150 836 ntBASIC14.39□□□□□ -0.11
HMGCS1Q01581 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 CLUHP6-201ENST00000580789 941 ntBASIC14.39□□□□□ -0.11
HMGCS1Q01581 CTBP2P3-201ENST00000585629 1255 ntBASIC14.39□□□□□ -0.11
HMGCS1Q01581 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 AC004466.1-201ENST00000599515 1080 ntBASIC14.39□□□□□ -0.11
HMGCS1Q01581 AC008494.3-201ENST00000606615 944 ntBASIC14.39□□□□□ -0.11
HMGCS1Q01581 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 AP005019.2-201ENST00000615104 511 ntBASIC14.39□□□□□ -0.11
HMGCS1Q01581 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 AC007326.2-201ENST00000624224 7579 ntBASIC14.39□□□□□ -0.11
HMGCS1Q01581 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HMGCS1Q01581 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMGCS1Q01581 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 PIN1P1-201ENST00000412108 996 ntBASIC14.38□□□□□ -0.11
HMGCS1Q01581 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 API5-211ENST00000534695 560 ntTSL 5 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 AC138761.1-201ENST00000584393 385 ntBASIC14.38□□□□□ -0.11
HMGCS1Q01581 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 AC012617.1-204ENST00000586340 2305 ntBASIC14.38□□□□□ -0.11
HMGCS1Q01581 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
HMGCS1Q01581 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HMGCS1Q01581 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms