Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN5P54829 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN5P54829 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PTPN5P54829 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.4■□□□□ 0.06
PTPN5P54829 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN5P54829 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
PTPN5P54829 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PTPN5P54829 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.4■□□□□ 0.06
PTPN5P54829 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
PTPN5P54829 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 WASH3P-207ENST00000560956 1394 ntBASIC15.4■□□□□ 0.06
PTPN5P54829 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PTPN5P54829 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN5P54829 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PTPN5P54829 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
PTPN5P54829 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
PTPN5P54829 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 AP000356.3-201ENST00000382243 753 ntBASIC15.4■□□□□ 0.06
PTPN5P54829 AL645937.2-201ENST00000396808 931 ntBASIC15.4■□□□□ 0.06
PTPN5P54829 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC15.4■□□□□ 0.06
PTPN5P54829 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 AC104073.2-201ENST00000453737 312 ntBASIC15.4■□□□□ 0.06
PTPN5P54829 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.4■□□□□ 0.06
PTPN5P54829 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC15.4■□□□□ 0.06
PTPN5P54829 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN5P54829 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC15.4■□□□□ 0.06
PTPN5P54829 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN5P54829 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC15.4■□□□□ 0.06
PTPN5P54829 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC15.4■□□□□ 0.06
PTPN5P54829 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC15.4■□□□□ 0.06
PTPN5P54829 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC15.4■□□□□ 0.06
PTPN5P54829 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN5P54829 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.4■□□□□ 0.06
PTPN5P54829 CDK7-214ENST00000626796 358 ntTSL 5 BASIC15.4■□□□□ 0.06
PTPN5P54829 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
PTPN5P54829 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN5P54829 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
PTPN5P54829 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PTPN5P54829 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.4■□□□□ 0.06
PTPN5P54829 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN5P54829 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 MROH4P-201ENST00000431302 1578 ntBASIC15.4■□□□□ 0.06
PTPN5P54829 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PTPN5P54829 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.4■□□□□ 0.06
PTPN5P54829 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.4■□□□□ 0.06
PTPN5P54829 KRT8P4-201ENST00000509735 1454 ntBASIC15.4■□□□□ 0.06
PTPN5P54829 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN5P54829 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PTPN5P54829 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN5P54829 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PTPN5P54829 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN5P54829 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
PTPN5P54829 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
PTPN5P54829 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PTPN5P54829 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PTPN5P54829 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.39■□□□□ 0.05
PTPN5P54829 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.39■□□□□ 0.05
PTPN5P54829 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC15.39■□□□□ 0.05
PTPN5P54829 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC15.39■□□□□ 0.05
PTPN5P54829 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms