Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.23□□□□□ -0.29
LHX2P50458 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.23□□□□□ -0.29
LHX2P50458 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LHX2P50458 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 FNTAP2-201ENST00000430308 634 ntBASIC13.23□□□□□ -0.29
LHX2P50458 AL645933.1-201ENST00000440087 609 ntBASIC13.23□□□□□ -0.29
LHX2P50458 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.23□□□□□ -0.29
LHX2P50458 AC104073.2-201ENST00000453737 312 ntBASIC13.23□□□□□ -0.29
LHX2P50458 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.23□□□□□ -0.29
LHX2P50458 RPL18P13-201ENST00000478088 569 ntBASIC13.23□□□□□ -0.29
LHX2P50458 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.23□□□□□ -0.29
LHX2P50458 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.23□□□□□ -0.29
LHX2P50458 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.23□□□□□ -0.29
LHX2P50458 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.23□□□□□ -0.29
LHX2P50458 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LHX2P50458 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.23□□□□□ -0.29
LHX2P50458 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.23□□□□□ -0.29
LHX2P50458 AL139099.5-201ENST00000635274 300 ntBASIC13.23□□□□□ -0.29
LHX2P50458 AC068587.8-201ENST00000641239 219 ntBASIC13.23□□□□□ -0.29
LHX2P50458 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.23□□□□□ -0.29
LHX2P50458 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.23□□□□□ -0.29
LHX2P50458 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.23□□□□□ -0.29
LHX2P50458 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LHX2P50458 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
LHX2P50458 AC139712.1-201ENST00000378256 1875 ntBASIC13.23□□□□□ -0.29
LHX2P50458 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LHX2P50458 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.23□□□□□ -0.29
LHX2P50458 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LHX2P50458 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.22□□□□□ -0.29
LHX2P50458 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 NORAD-201ENST00000565493 5339 ntBASIC13.22□□□□□ -0.29
LHX2P50458 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.22□□□□□ -0.29
LHX2P50458 AC067930.6-201ENST00000623257 4947 ntBASIC13.22□□□□□ -0.29
LHX2P50458 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
LHX2P50458 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.22□□□□□ -0.29
LHX2P50458 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
LHX2P50458 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.22□□□□□ -0.29
LHX2P50458 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LHX2P50458 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LHX2P50458 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.22□□□□□ -0.29
LHX2P50458 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.22□□□□□ -0.29
LHX2P50458 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
LHX2P50458 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.22□□□□□ -0.29
LHX2P50458 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
LHX2P50458 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.22□□□□□ -0.29
LHX2P50458 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.22□□□□□ -0.29
LHX2P50458 AC016700.1-201ENST00000429424 312 ntBASIC13.22□□□□□ -0.29
LHX2P50458 CALR4P-201ENST00000431943 946 ntBASIC13.22□□□□□ -0.29
LHX2P50458 EIF4HP1-201ENST00000453115 687 ntBASIC13.22□□□□□ -0.29
LHX2P50458 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
LHX2P50458 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.22□□□□□ -0.29
LHX2P50458 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.22□□□□□ -0.29
LHX2P50458 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.22□□□□□ -0.29
LHX2P50458 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.22□□□□□ -0.29
LHX2P50458 AC103988.2-201ENST00000561804 725 ntBASIC13.22□□□□□ -0.29
LHX2P50458 AC013355.1-201ENST00000562625 723 ntBASIC13.22□□□□□ -0.29
LHX2P50458 AC005962.1-201ENST00000584100 773 ntBASIC13.22□□□□□ -0.29
LHX2P50458 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.22□□□□□ -0.29
LHX2P50458 AP000346.4-201ENST00000614827 381 ntBASIC13.22□□□□□ -0.29
LHX2P50458 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.22□□□□□ -0.29
LHX2P50458 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
LHX2P50458 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LHX2P50458 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms