Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRCC3P46736 AP000346.4-201ENST00000614827 381 ntBASIC15.75■□□□□ 0.11
BRCC3P46736 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.75■□□□□ 0.11
BRCC3P46736 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.75■□□□□ 0.11
BRCC3P46736 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.75■□□□□ 0.11
BRCC3P46736 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.75■□□□□ 0.11
BRCC3P46736 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.75■□□□□ 0.11
BRCC3P46736 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRCC3P46736 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.75■□□□□ 0.11
BRCC3P46736 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BRCC3P46736 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRCC3P46736 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BRCC3P46736 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRCC3P46736 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
BRCC3P46736 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
BRCC3P46736 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRCC3P46736 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRCC3P46736 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.75■□□□□ 0.11
BRCC3P46736 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRCC3P46736 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
BRCC3P46736 CYP4F23P-201ENST00000593402 1579 ntBASIC15.75■□□□□ 0.11
BRCC3P46736 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
BRCC3P46736 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRCC3P46736 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.74■□□□□ 0.11
BRCC3P46736 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRCC3P46736 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRCC3P46736 FLJ16779-201ENST00000612722 7638 ntBASIC15.74■□□□□ 0.11
BRCC3P46736 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRCC3P46736 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRCC3P46736 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
BRCC3P46736 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
BRCC3P46736 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRCC3P46736 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRCC3P46736 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRCC3P46736 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRCC3P46736 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRCC3P46736 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.74■□□□□ 0.11
BRCC3P46736 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.74■□□□□ 0.11
BRCC3P46736 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.74■□□□□ 0.11
BRCC3P46736 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.74■□□□□ 0.11
BRCC3P46736 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.74■□□□□ 0.11
BRCC3P46736 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.74■□□□□ 0.11
BRCC3P46736 AL133466.1-201ENST00000447582 150 ntBASIC15.74■□□□□ 0.11
BRCC3P46736 NUP210P1-202ENST00000504322 710 ntBASIC15.74■□□□□ 0.11
BRCC3P46736 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
BRCC3P46736 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.74■□□□□ 0.11
BRCC3P46736 RERG-205ENST00000537647 935 ntTSL 2 BASIC15.74■□□□□ 0.11
BRCC3P46736 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC15.74■□□□□ 0.11
BRCC3P46736 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.74■□□□□ 0.11
BRCC3P46736 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.74■□□□□ 0.11
BRCC3P46736 FGFR3P5-201ENST00000564496 886 ntBASIC15.74■□□□□ 0.11
BRCC3P46736 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.74■□□□□ 0.11
BRCC3P46736 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRCC3P46736 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.74■□□□□ 0.11
BRCC3P46736 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.74■□□□□ 0.11
BRCC3P46736 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
BRCC3P46736 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.74■□□□□ 0.11
BRCC3P46736 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.74■□□□□ 0.11
BRCC3P46736 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRCC3P46736 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.74■□□□□ 0.11
BRCC3P46736 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
BRCC3P46736 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
BRCC3P46736 TMBIM7P-202ENST00000641474 1516 ntBASIC15.73■□□□□ 0.11
BRCC3P46736 AC144522.1-201ENST00000625111 1658 ntBASIC15.73■□□□□ 0.11
BRCC3P46736 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRCC3P46736 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRCC3P46736 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BRCC3P46736 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.73■□□□□ 0.11
BRCC3P46736 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BRCC3P46736 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRCC3P46736 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRCC3P46736 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRCC3P46736 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.73■□□□□ 0.11
BRCC3P46736 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRCC3P46736 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.73■□□□□ 0.11
BRCC3P46736 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.73■□□□□ 0.11
BRCC3P46736 AC018529.2-202ENST00000611482 3087 ntBASIC15.73■□□□□ 0.11
BRCC3P46736 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.73■□□□□ 0.11
BRCC3P46736 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BRCC3P46736 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRCC3P46736 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRCC3P46736 RN7SKP214-201ENST00000364208 315 ntBASIC15.73■□□□□ 0.11
BRCC3P46736 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.73■□□□□ 0.11
BRCC3P46736 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.73■□□□□ 0.11
BRCC3P46736 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.73■□□□□ 0.11
BRCC3P46736 AC006122.1-201ENST00000493323 440 ntBASIC15.73■□□□□ 0.11
BRCC3P46736 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.73■□□□□ 0.11
BRCC3P46736 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.73■□□□□ 0.11
BRCC3P46736 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
BRCC3P46736 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC15.73■□□□□ 0.11
BRCC3P46736 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.73■□□□□ 0.11
BRCC3P46736 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.73■□□□□ 0.11
BRCC3P46736 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.73■□□□□ 0.11
BRCC3P46736 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.73■□□□□ 0.11
BRCC3P46736 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.73■□□□□ 0.11
BRCC3P46736 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
BRCC3P46736 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRCC3P46736 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
BRCC3P46736 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.73■□□□□ 0.11
BRCC3P46736 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms