Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HOXC8P31273 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.93■□□□□ 0.14
HOXC8P31273 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.93■□□□□ 0.14
HOXC8P31273 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.93■□□□□ 0.14
HOXC8P31273 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HOXC8P31273 SORD2P-201ENST00000558556 1069 ntBASIC15.93■□□□□ 0.14
HOXC8P31273 MT3-203ENST00000565838 421 ntTSL 3 BASIC15.93■□□□□ 0.14
HOXC8P31273 AC005041.3-201ENST00000606287 649 ntBASIC15.93■□□□□ 0.14
HOXC8P31273 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
HOXC8P31273 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
HOXC8P31273 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
HOXC8P31273 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HOXC8P31273 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HOXC8P31273 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.93■□□□□ 0.14
HOXC8P31273 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
HOXC8P31273 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HOXC8P31273 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
HOXC8P31273 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
HOXC8P31273 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC15.93■□□□□ 0.14
HOXC8P31273 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
HOXC8P31273 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.92■□□□□ 0.14
HOXC8P31273 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.92■□□□□ 0.14
HOXC8P31273 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.92■□□□□ 0.14
HOXC8P31273 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.92■□□□□ 0.14
HOXC8P31273 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
HOXC8P31273 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.92■□□□□ 0.14
HOXC8P31273 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 HIST2H2BA-201ENST00000412169 381 ntBASIC15.92■□□□□ 0.14
HOXC8P31273 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.92■□□□□ 0.14
HOXC8P31273 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.92■□□□□ 0.14
HOXC8P31273 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 AL161932.2-201ENST00000435436 679 ntBASIC15.92■□□□□ 0.14
HOXC8P31273 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.92■□□□□ 0.14
HOXC8P31273 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.92■□□□□ 0.14
HOXC8P31273 AC021016.3-201ENST00000608367 477 ntBASIC15.92■□□□□ 0.14
HOXC8P31273 AC104506.1-201ENST00000609247 429 ntBASIC15.92■□□□□ 0.14
HOXC8P31273 AC105137.3-201ENST00000617588 984 ntBASIC15.92■□□□□ 0.14
HOXC8P31273 AC009145.4-201ENST00000625119 1294 ntBASIC15.92■□□□□ 0.14
HOXC8P31273 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.92■□□□□ 0.14
HOXC8P31273 AL354702.1-201ENST00000442006 1960 ntBASIC15.92■□□□□ 0.14
HOXC8P31273 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC15.92■□□□□ 0.14
HOXC8P31273 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
HOXC8P31273 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.92■□□□□ 0.14
HOXC8P31273 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HOXC8P31273 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HOXC8P31273 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
HOXC8P31273 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.91■□□□□ 0.14
HOXC8P31273 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HOXC8P31273 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HOXC8P31273 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HOXC8P31273 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HOXC8P31273 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HOXC8P31273 MYADML-201ENST00000474610 2147 ntBASIC15.91■□□□□ 0.14
HOXC8P31273 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
HOXC8P31273 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HOXC8P31273 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
HOXC8P31273 LINC00554-201ENST00000564841 3011 ntBASIC15.91■□□□□ 0.14
HOXC8P31273 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HOXC8P31273 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HOXC8P31273 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HOXC8P31273 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.91■□□□□ 0.14
HOXC8P31273 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HOXC8P31273 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.91■□□□□ 0.14
HOXC8P31273 AC073869.2-201ENST00000417338 1026 ntBASIC15.91■□□□□ 0.14
HOXC8P31273 GUSBP10-201ENST00000417412 665 ntBASIC15.91■□□□□ 0.14
HOXC8P31273 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HOXC8P31273 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.91■□□□□ 0.14
HOXC8P31273 AC079112.1-201ENST00000454972 939 ntBASIC15.91■□□□□ 0.14
HOXC8P31273 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.91■□□□□ 0.14
HOXC8P31273 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.91■□□□□ 0.14
HOXC8P31273 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HOXC8P31273 AC140658.4-201ENST00000561990 352 ntBASIC15.91■□□□□ 0.14
HOXC8P31273 AC005586.2-201ENST00000563946 837 ntBASIC15.91■□□□□ 0.14
HOXC8P31273 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.91■□□□□ 0.14
HOXC8P31273 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.91■□□□□ 0.14
HOXC8P31273 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
HOXC8P31273 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.91■□□□□ 0.14
HOXC8P31273 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HOXC8P31273 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.91■□□□□ 0.14
HOXC8P31273 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HOXC8P31273 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.91■□□□□ 0.14
HOXC8P31273 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms