Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.5□□□□□ -0.25
GDF1P27539 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 MIR1247-201ENST00000408206 136 ntBASIC13.5□□□□□ -0.25
GDF1P27539 AL354877.1-201ENST00000424412 413 ntBASIC13.5□□□□□ -0.25
GDF1P27539 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.5□□□□□ -0.25
GDF1P27539 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.5□□□□□ -0.25
GDF1P27539 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.5□□□□□ -0.25
GDF1P27539 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.5□□□□□ -0.25
GDF1P27539 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.5□□□□□ -0.25
GDF1P27539 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.5□□□□□ -0.25
GDF1P27539 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.5□□□□□ -0.25
GDF1P27539 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC13.5□□□□□ -0.25
GDF1P27539 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
GDF1P27539 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.5□□□□□ -0.25
GDF1P27539 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 MIR6787-201ENST00000616675 61 ntBASIC13.5□□□□□ -0.25
GDF1P27539 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.5□□□□□ -0.25
GDF1P27539 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.5□□□□□ -0.25
GDF1P27539 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
GDF1P27539 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
GDF1P27539 SHC1P1-201ENST00000425230 1745 ntBASIC13.5□□□□□ -0.25
GDF1P27539 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
GDF1P27539 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.5□□□□□ -0.25
GDF1P27539 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GDF1P27539 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.5□□□□□ -0.25
GDF1P27539 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.49□□□□□ -0.25
GDF1P27539 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.49□□□□□ -0.25
GDF1P27539 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.49□□□□□ -0.25
GDF1P27539 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
GDF1P27539 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
GDF1P27539 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
GDF1P27539 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
GDF1P27539 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
GDF1P27539 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.49□□□□□ -0.25
GDF1P27539 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.49□□□□□ -0.25
GDF1P27539 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
GDF1P27539 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
GDF1P27539 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.49□□□□□ -0.25
GDF1P27539 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.49□□□□□ -0.25
GDF1P27539 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.49□□□□□ -0.25
GDF1P27539 AC022494.1-201ENST00000466044 728 ntBASIC13.49□□□□□ -0.25
GDF1P27539 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.49□□□□□ -0.25
GDF1P27539 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
GDF1P27539 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.49□□□□□ -0.25
GDF1P27539 AC100827.2-201ENST00000563214 1194 ntBASIC13.49□□□□□ -0.25
GDF1P27539 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.49□□□□□ -0.25
GDF1P27539 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.49□□□□□ -0.25
GDF1P27539 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.49□□□□□ -0.25
GDF1P27539 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.49□□□□□ -0.25
GDF1P27539 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
GDF1P27539 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
GDF1P27539 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
GDF1P27539 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
GDF1P27539 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.48□□□□□ -0.25
GDF1P27539 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GDF1P27539 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GDF1P27539 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.48□□□□□ -0.25
GDF1P27539 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms