Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP3P12645 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP3P12645 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP3P12645 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP3P12645 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BMP3P12645 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP3P12645 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.06■□□□□ 0.32
BMP3P12645 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.05■□□□□ 0.32
BMP3P12645 KRT8P28-201ENST00000433288 1390 ntBASIC17.05■□□□□ 0.32
BMP3P12645 FAS-202ENST00000352159 1722 ntTSL 5 BASIC17.05■□□□□ 0.32
BMP3P12645 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BMP3P12645 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.05■□□□□ 0.32
BMP3P12645 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC17.05■□□□□ 0.32
BMP3P12645 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC17.05■□□□□ 0.32
BMP3P12645 RN7SL769P-201ENST00000469386 295 ntBASIC17.05■□□□□ 0.32
BMP3P12645 RN7SL720P-201ENST00000488178 304 ntBASIC17.05■□□□□ 0.32
BMP3P12645 NUP210P1-202ENST00000504322 710 ntBASIC17.05■□□□□ 0.32
BMP3P12645 RNA5SP423-201ENST00000517127 109 ntBASIC17.05■□□□□ 0.32
BMP3P12645 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.05■□□□□ 0.32
BMP3P12645 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.05■□□□□ 0.32
BMP3P12645 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.05■□□□□ 0.32
BMP3P12645 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
BMP3P12645 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.05■□□□□ 0.32
BMP3P12645 RN7SL574P-201ENST00000581512 297 ntBASIC17.05■□□□□ 0.32
BMP3P12645 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.05■□□□□ 0.32
BMP3P12645 AC133540.1-201ENST00000620845 1019 ntBASIC17.05■□□□□ 0.32
BMP3P12645 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
BMP3P12645 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
BMP3P12645 AC139712.1-201ENST00000378256 1875 ntBASIC17.05■□□□□ 0.32
BMP3P12645 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.05■□□□□ 0.32
BMP3P12645 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
BMP3P12645 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
BMP3P12645 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.04■□□□□ 0.32
BMP3P12645 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
BMP3P12645 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
BMP3P12645 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC17.04■□□□□ 0.32
BMP3P12645 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
BMP3P12645 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.04■□□□□ 0.32
BMP3P12645 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 AL596276.2-201ENST00000447525 331 ntBASIC17.04■□□□□ 0.32
BMP3P12645 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.04■□□□□ 0.32
BMP3P12645 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.04■□□□□ 0.32
BMP3P12645 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.04■□□□□ 0.32
BMP3P12645 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.04■□□□□ 0.32
BMP3P12645 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
BMP3P12645 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.04■□□□□ 0.32
BMP3P12645 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BMP3P12645 AC009093.10-201ENST00000641956 1442 ntBASIC17.04■□□□□ 0.32
BMP3P12645 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
BMP3P12645 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.04■□□□□ 0.32
BMP3P12645 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
BMP3P12645 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BMP3P12645 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
BMP3P12645 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.03■□□□□ 0.32
BMP3P12645 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
BMP3P12645 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.03■□□□□ 0.32
BMP3P12645 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BMP3P12645 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.03■□□□□ 0.32
BMP3P12645 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms