Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CD48P09326 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.41■□□□□ 0.06
CD48P09326 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.41■□□□□ 0.06
CD48P09326 FTH1P14-201ENST00000482930 551 ntBASIC15.41■□□□□ 0.06
CD48P09326 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CD48P09326 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.41■□□□□ 0.06
CD48P09326 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.41■□□□□ 0.06
CD48P09326 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CD48P09326 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.41■□□□□ 0.06
CD48P09326 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.41■□□□□ 0.06
CD48P09326 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.41■□□□□ 0.06
CD48P09326 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.41■□□□□ 0.06
CD48P09326 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
CD48P09326 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 MYADML-201ENST00000474610 2147 ntBASIC15.41■□□□□ 0.06
CD48P09326 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.41■□□□□ 0.06
CD48P09326 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CD48P09326 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CD48P09326 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.41■□□□□ 0.06
CD48P09326 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CD48P09326 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CD48P09326 AC136759.1-202ENST00000530858 2194 ntBASIC15.41■□□□□ 0.06
CD48P09326 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CD48P09326 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 AC005840.4-201ENST00000541242 2494 ntBASIC15.4■□□□□ 0.06
CD48P09326 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CD48P09326 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.4■□□□□ 0.06
CD48P09326 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.4■□□□□ 0.06
CD48P09326 AC015688.4-201ENST00000580780 1647 ntBASIC15.4■□□□□ 0.06
CD48P09326 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CD48P09326 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.4■□□□□ 0.06
CD48P09326 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.4■□□□□ 0.06
CD48P09326 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.4■□□□□ 0.06
CD48P09326 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.4■□□□□ 0.06
CD48P09326 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.4■□□□□ 0.06
CD48P09326 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CD48P09326 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 COX5BP8-201ENST00000416911 349 ntBASIC15.4■□□□□ 0.06
CD48P09326 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.4■□□□□ 0.06
CD48P09326 FAM197Y7-201ENST00000432892 766 ntBASIC15.4■□□□□ 0.06
CD48P09326 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.4■□□□□ 0.06
CD48P09326 FTLP10-202ENST00000505798 471 ntBASIC15.4■□□□□ 0.06
CD48P09326 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.4■□□□□ 0.06
CD48P09326 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 AC041040.2-201ENST00000622926 2899 ntBASIC15.4■□□□□ 0.06
CD48P09326 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
CD48P09326 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.4■□□□□ 0.06
CD48P09326 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CD48P09326 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CD48P09326 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CD48P09326 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CD48P09326 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.39■□□□□ 0.05
CD48P09326 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.39■□□□□ 0.05
CD48P09326 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.39■□□□□ 0.05
CD48P09326 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.39■□□□□ 0.05
CD48P09326 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.39■□□□□ 0.05
CD48P09326 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CD48P09326 AC106820.3-201ENST00000561653 397 ntBASIC15.39■□□□□ 0.05
CD48P09326 AC015936.2-201ENST00000593177 259 ntBASIC15.39■□□□□ 0.05
CD48P09326 AC233724.13-201ENST00000598383 410 ntBASIC15.39■□□□□ 0.05
CD48P09326 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms