Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PCCBP05166 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCCBP05166 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.72□□□□□ -0.05
PCCBP05166 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.72□□□□□ -0.05
PCCBP05166 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.72□□□□□ -0.05
PCCBP05166 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCCBP05166 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCCBP05166 AC091804.1-201ENST00000486888 567 ntBASIC14.72□□□□□ -0.05
PCCBP05166 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCCBP05166 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.72□□□□□ -0.05
PCCBP05166 DUX4L46-201ENST00000566845 751 ntBASIC14.72□□□□□ -0.05
PCCBP05166 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.72□□□□□ -0.05
PCCBP05166 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCCBP05166 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.72□□□□□ -0.05
PCCBP05166 AL162426.1-201ENST00000624141 743 ntBASIC14.72□□□□□ -0.05
PCCBP05166 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.72□□□□□ -0.05
PCCBP05166 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PCCBP05166 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCCBP05166 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCCBP05166 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCCBP05166 AC104640.1-201ENST00000562617 2109 ntBASIC14.72□□□□□ -0.05
PCCBP05166 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCCBP05166 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCCBP05166 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.72□□□□□ -0.05
PCCBP05166 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCCBP05166 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCCBP05166 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCCBP05166 AL136172.1-201ENST00000598590 1394 ntBASIC14.72□□□□□ -0.05
PCCBP05166 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCCBP05166 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.71□□□□□ -0.05
PCCBP05166 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.71□□□□□ -0.05
PCCBP05166 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.71□□□□□ -0.05
PCCBP05166 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
PCCBP05166 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
PCCBP05166 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.71□□□□□ -0.05
PCCBP05166 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
PCCBP05166 BCYRN1-201ENST00000418539 200 ntBASIC14.71□□□□□ -0.05
PCCBP05166 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.71□□□□□ -0.05
PCCBP05166 SERPINA13P-202ENST00000478994 924 ntBASIC14.71□□□□□ -0.05
PCCBP05166 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.71□□□□□ -0.05
PCCBP05166 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.71□□□□□ -0.05
PCCBP05166 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.71□□□□□ -0.05
PCCBP05166 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.71□□□□□ -0.05
PCCBP05166 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
PCCBP05166 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.71□□□□□ -0.05
PCCBP05166 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCCBP05166 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
PCCBP05166 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.71□□□□□ -0.05
PCCBP05166 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PCCBP05166 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.71□□□□□ -0.06
PCCBP05166 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCCBP05166 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCCBP05166 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCCBP05166 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCCBP05166 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCCBP05166 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PCCBP05166 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCCBP05166 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCCBP05166 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
PCCBP05166 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCCBP05166 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
PCCBP05166 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCCBP05166 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCCBP05166 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCCBP05166 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PCCBP05166 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCCBP05166 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCCBP05166 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCCBP05166 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCCBP05166 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCCBP05166 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCCBP05166 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCCBP05166 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCCBP05166 NKAIN1P1-201ENST00000435754 582 ntBASIC14.7□□□□□ -0.06
PCCBP05166 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.7□□□□□ -0.06
PCCBP05166 EIF4HP1-201ENST00000453115 687 ntBASIC14.7□□□□□ -0.06
PCCBP05166 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.7□□□□□ -0.06
PCCBP05166 AC005740.2-201ENST00000511085 419 ntBASIC14.7□□□□□ -0.06
PCCBP05166 SCARNA20.5-201ENST00000516991 142 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms