Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 AL391280.1-201ENST00000506969 1062 ntBASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA2E9PIF3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 AC079178.1-201ENST00000420915 656 ntBASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 HLA-K-203ENST00000430151 1046 ntBASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 RN7SL713P-201ENST00000582127 302 ntBASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 AL606495.2-201ENST00000605867 535 ntBASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 AL603764.1-201ENST00000636452 321 ntBASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 REXO1L2P-201ENST00000425429 2069 ntBASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NPIPA2E9PIF3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NPIPA2E9PIF3 LILRP1-201ENST00000444199 1370 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms