Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 MYO15B-237ENST00000642007 4893 ntBASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.53■□□□□ 0.4
PTPDC1A2A3K4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 AHCYP2-201ENST00000430630 1300 ntBASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 DUX4L45-201ENST00000566406 1057 ntBASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 AC004466.1-201ENST00000599515 1080 ntBASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 MIR6869-201ENST00000619434 62 ntBASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC17.52■□□□□ 0.4
PTPDC1A2A3K4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPDC1A2A3K4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPDC1A2A3K4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPDC1A2A3K4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.52■□□□□ 0.39
PTPDC1A2A3K4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPDC1A2A3K4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PTPDC1A2A3K4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPDC1A2A3K4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PTPDC1A2A3K4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPDC1A2A3K4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
PTPDC1A2A3K4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTPDC1A2A3K4 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 AC117489.1-201ENST00000625169 3217 ntBASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 TPM3P8-201ENST00000330554 643 ntBASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 AC108725.1-201ENST00000495472 409 ntBASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 GPR182-203ENST00000622922 591 ntBASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PTPDC1A2A3K4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PTPDC1A2A3K4 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms