Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Gm6152-201ENSMUST00000151704 340 ntBASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 AC124732.1-201ENSMUST00000221551 910 ntBASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Rbm3-201ENSMUST00000040010 2792 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trav8-1A0A075B641 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Tti2-201ENSMUST00000098842 5039 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Gm12341-201ENSMUST00000119724 503 ntBASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Gm24136-201ENSMUST00000083374 165 ntBASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Gm8420-201ENSMUST00000097103 598 ntBASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Gm5766-201ENSMUST00000160520 1977 ntBASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Gm43372-201ENSMUST00000202662 3016 ntBASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Mdm4-206ENSMUST00000186617 4694 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Gm15897-201ENSMUST00000117770 1486 ntBASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Gm3365-201ENSMUST00000216296 1480 ntBASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms