Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC003102.2-201ENST00000589195 1469 ntBASIC17.8■□□□□ 0.44
ZC3H4Q9UPT8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZC3H4Q9UPT8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
ZC3H4Q9UPT8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZC3H4Q9UPT8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZC3H4Q9UPT8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZC3H4Q9UPT8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZC3H4Q9UPT8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZC3H4Q9UPT8 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
ZC3H4Q9UPT8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZC3H4Q9UPT8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 MIR1301-201ENST00000408518 82 ntBASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 OR51A9P-201ENST00000422578 911 ntBASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 GNG10P1-201ENST00000452289 199 ntBASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 RN7SL530P-201ENST00000485097 298 ntBASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 RN7SL357P-201ENST00000581065 298 ntBASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 AC006483.2-201ENST00000609813 515 ntBASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 AC127383.1-201ENST00000444697 1800 ntBASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 ENPP7P8-202ENST00000527856 1345 ntBASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
ZC3H4Q9UPT8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 ACTG1P19-201ENST00000418987 1116 ntBASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 AC068867.1-201ENST00000559855 150 ntBASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 DBET-201ENST00000630918 3363 ntBASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZC3H4Q9UPT8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 LINC02228-204ENST00000642115 2962 ntBASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 AC018638.5-201ENST00000450885 754 ntBASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 AC023906.1-201ENST00000486386 453 ntBASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ZC3H4Q9UPT8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms