Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 FKBP4P6-201ENST00000457486 1332 ntBASIC14.24□□□□□ -0.13
BRF2Q9HAW0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AC005229.1-201ENST00000392885 409 ntBASIC14.24□□□□□ -0.13
BRF2Q9HAW0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AL355864.2-201ENST00000447420 863 ntBASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AP001002.3-201ENST00000623482 206 ntBASIC14.24□□□□□ -0.13
BRF2Q9HAW0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
BRF2Q9HAW0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 AC007389.4-201ENST00000454674 793 ntBASIC14.23□□□□□ -0.13
BRF2Q9HAW0 AP001889.1-201ENST00000525414 633 ntBASIC14.23□□□□□ -0.13
BRF2Q9HAW0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 AC103988.2-201ENST00000561804 725 ntBASIC14.23□□□□□ -0.13
BRF2Q9HAW0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 AC015936.2-201ENST00000593177 259 ntBASIC14.23□□□□□ -0.13
BRF2Q9HAW0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
BRF2Q9HAW0 AC015688.4-201ENST00000580780 1647 ntBASIC14.23□□□□□ -0.13
BRF2Q9HAW0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 TPM3P8-201ENST00000330554 643 ntBASIC14.22□□□□□ -0.13
BRF2Q9HAW0 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
BRF2Q9HAW0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 219.3 ms