Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 ABHD17AP9-201ENST00000561925 548 ntBASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 AP005264.6-204ENST00000588436 719 ntBASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 AL118522.1-201ENST00000611368 560 ntBASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.88■□□□□ 0.13
TRIM43Q96BQ3 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 PYY2-201ENST00000315776 282 ntBASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 ACTG1P19-201ENST00000418987 1116 ntBASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 RN7SL665P-201ENST00000578793 300 ntBASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 AL627230.2-201ENST00000613254 655 ntBASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 TEKT4P2-202ENST00000559466 1312 ntBASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRIM43Q96BQ3 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 AC004554.1-201ENST00000422830 1468 ntBASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 HNRNPA1P58-201ENST00000403629 610 ntBASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 AC063952.3-201ENST00000467756 308 ntBASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 RN7SL582P-201ENST00000491078 279 ntBASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 AC106047.2-201ENST00000511723 743 ntBASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 GDNF-207ENST00000515058 764 ntTSL 5 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC15.86■□□□□ 0.13
TRIM43Q96BQ3 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms