Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 AC010319.3-201ENST00000597028 470 ntBASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 AC055811.4-201ENST00000624039 1754 ntBASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NHLRC1Q6VVB1 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 AL928921.2-201ENST00000641325 2442 ntBASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 KRT8P35-201ENST00000483942 1338 ntBASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 AC097376.2-205ENST00000610159 5334 ntBASIC13.43□□□□□ -0.26
NHLRC1Q6VVB1 AC027601.5-201ENST00000624065 2482 ntBASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NHLRC1Q6VVB1 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms