Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
PCDH1Q08174 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDH1Q08174 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PCDH1Q08174 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 AC092933.1-201ENST00000393644 945 ntBASIC14.39□□□□□ -0.11
PCDH1Q08174 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 CD8B2-202ENST00000417670 633 ntBASIC14.39□□□□□ -0.11
PCDH1Q08174 SERPINA7P1-201ENST00000443077 631 ntBASIC14.39□□□□□ -0.11
PCDH1Q08174 COX20P2-201ENST00000452636 358 ntBASIC14.39□□□□□ -0.11
PCDH1Q08174 RN7SL837P-201ENST00000463010 287 ntBASIC14.39□□□□□ -0.11
PCDH1Q08174 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 FTLP10-202ENST00000505798 471 ntBASIC14.39□□□□□ -0.11
PCDH1Q08174 AC022447.6-201ENST00000515522 438 ntBASIC14.39□□□□□ -0.11
PCDH1Q08174 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDH1Q08174 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.39□□□□□ -0.11
PCDH1Q08174 TDH-203ENST00000531764 1110 ntBASIC14.39□□□□□ -0.11
PCDH1Q08174 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCDH1Q08174 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDH1Q08174 AC025279.2-201ENST00000569730 653 ntBASIC14.39□□□□□ -0.11
PCDH1Q08174 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDH1Q08174 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDH1Q08174 MIR6074-201ENST00000612054 107 ntBASIC14.39□□□□□ -0.11
PCDH1Q08174 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDH1Q08174 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDH1Q08174 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDH1Q08174 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 ST20-AS1-201ENST00000560255 4223 ntBASIC14.39□□□□□ -0.11
PCDH1Q08174 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCDH1Q08174 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDH1Q08174 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDH1Q08174 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
PCDH1Q08174 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDH1Q08174 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCDH1Q08174 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH1Q08174 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH1Q08174 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDH1Q08174 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCDH1Q08174 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH1Q08174 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH1Q08174 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH1Q08174 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH1Q08174 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDH1Q08174 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH1Q08174 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH1Q08174 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PCDH1Q08174 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH1Q08174 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDH1Q08174 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
PCDH1Q08174 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.38□□□□□ -0.11
PCDH1Q08174 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDH1Q08174 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.38□□□□□ -0.11
PCDH1Q08174 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH1Q08174 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.38□□□□□ -0.11
PCDH1Q08174 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH1Q08174 AL358472.5-202ENST00000641448 1267 ntBASIC14.38□□□□□ -0.11
PCDH1Q08174 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PCDH1Q08174 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PCDH1Q08174 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDH1Q08174 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
PCDH1Q08174 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDH1Q08174 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH1Q08174 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH1Q08174 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH1Q08174 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCDH1Q08174 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 HSPA7-201ENST00000445535 1927 ntBASIC14.37□□□□□ -0.11
PCDH1Q08174 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDH1Q08174 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDH1Q08174 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PCDH1Q08174 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PCDH1Q08174 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
PCDH1Q08174 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCDH1Q08174 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDH1Q08174 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDH1Q08174 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
PCDH1Q08174 RN7SL752P-201ENST00000463779 287 ntBASIC14.37□□□□□ -0.11
PCDH1Q08174 USP32P1-208ENST00000506594 1164 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms