Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC10.57□□□□□ -0.72
CKS1BP61024 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 AC002056.1-201ENST00000395613 760 ntBASIC10.57□□□□□ -0.72
CKS1BP61024 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 RAC2-202ENST00000401529 569 ntTSL 4 BASIC10.57□□□□□ -0.72
CKS1BP61024 IGLL3P-201ENST00000412472 434 ntBASIC10.57□□□□□ -0.72
CKS1BP61024 CRCP-205ENST00000431089 942 ntTSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 RHOQP3-201ENST00000437982 621 ntBASIC10.57□□□□□ -0.72
CKS1BP61024 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 HCG4B-203ENST00000450128 991 ntBASIC10.57□□□□□ -0.72
CKS1BP61024 EMBP1-201ENST00000458200 901 ntBASIC10.57□□□□□ -0.72
CKS1BP61024 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
CKS1BP61024 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC10.57□□□□□ -0.72
CKS1BP61024 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC10.57□□□□□ -0.72
CKS1BP61024 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
CKS1BP61024 AC012313.10-201ENST00000623509 926 ntBASIC10.57□□□□□ -0.72
CKS1BP61024 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC10.57□□□□□ -0.72
CKS1BP61024 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC10.57□□□□□ -0.72
CKS1BP61024 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
CKS1BP61024 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 INTS4P1-203ENST00000641008 3683 ntBASIC10.57□□□□□ -0.72
CKS1BP61024 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
CKS1BP61024 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
CKS1BP61024 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 REM2-202ENST00000536884 1331 ntTSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CKS1BP61024 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 NARF-206ENST00000457415 1668 ntTSL 5 BASIC10.57□□□□□ -0.72
CKS1BP61024 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
CKS1BP61024 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
CKS1BP61024 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 BNIP3P1-202ENST00000550043 1585 ntBASIC10.56□□□□□ -0.72
CKS1BP61024 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 IYD-208ENST00000500320 2158 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC10.56□□□□□ -0.72
CKS1BP61024 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC10.56□□□□□ -0.72
CKS1BP61024 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC10.56□□□□□ -0.72
CKS1BP61024 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
CKS1BP61024 IPPK-202ENST00000375522 882 ntTSL 3 BASIC10.56□□□□□ -0.72
CKS1BP61024 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC10.56□□□□□ -0.72
CKS1BP61024 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC10.56□□□□□ -0.72
CKS1BP61024 AC009947.1-201ENST00000444350 727 ntBASIC10.56□□□□□ -0.72
CKS1BP61024 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC10.56□□□□□ -0.72
CKS1BP61024 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 SMN2-210ENST00000511812 867 ntTSL 2 BASIC10.56□□□□□ -0.72
CKS1BP61024 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms