Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.42■□□□□ 0.06
NEK3P51956 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEK3P51956 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NEK3P51956 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.42■□□□□ 0.06
NEK3P51956 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEK3P51956 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.42■□□□□ 0.06
NEK3P51956 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.42■□□□□ 0.06
NEK3P51956 ACTBP8-201ENST00000403258 1108 ntBASIC15.42■□□□□ 0.06
NEK3P51956 KLF2P2-201ENST00000416807 1039 ntBASIC15.42■□□□□ 0.06
NEK3P51956 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.42■□□□□ 0.06
NEK3P51956 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NEK3P51956 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEK3P51956 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEK3P51956 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.42■□□□□ 0.06
NEK3P51956 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.42■□□□□ 0.06
NEK3P51956 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.42■□□□□ 0.06
NEK3P51956 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.42■□□□□ 0.06
NEK3P51956 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NEK3P51956 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.42■□□□□ 0.06
NEK3P51956 KRT90P-201ENST00000549264 1064 ntBASIC15.42■□□□□ 0.06
NEK3P51956 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
NEK3P51956 SAMD11P1-201ENST00000571429 661 ntBASIC15.42■□□□□ 0.06
NEK3P51956 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NEK3P51956 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.42■□□□□ 0.06
NEK3P51956 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.42■□□□□ 0.06
NEK3P51956 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.42■□□□□ 0.06
NEK3P51956 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NEK3P51956 AC244669.2-201ENST00000612320 853 ntBASIC15.42■□□□□ 0.06
NEK3P51956 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.42■□□□□ 0.06
NEK3P51956 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEK3P51956 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NEK3P51956 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEK3P51956 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NEK3P51956 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEK3P51956 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
NEK3P51956 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEK3P51956 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NEK3P51956 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NEK3P51956 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NEK3P51956 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.41■□□□□ 0.06
NEK3P51956 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.41■□□□□ 0.06
NEK3P51956 AC005252.3-201ENST00000623855 2258 ntBASIC15.41■□□□□ 0.06
NEK3P51956 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.41■□□□□ 0.06
NEK3P51956 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NEK3P51956 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.41■□□□□ 0.06
NEK3P51956 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NEK3P51956 AC018442.1-201ENST00000421439 2061 ntBASIC15.41■□□□□ 0.06
NEK3P51956 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NEK3P51956 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NEK3P51956 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.41■□□□□ 0.06
NEK3P51956 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.41■□□□□ 0.06
NEK3P51956 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.41■□□□□ 0.06
NEK3P51956 FO681548.1-201ENST00000455617 1132 ntBASIC15.41■□□□□ 0.06
NEK3P51956 AC025279.2-201ENST00000569730 653 ntBASIC15.41■□□□□ 0.06
NEK3P51956 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.41■□□□□ 0.06
NEK3P51956 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.41■□□□□ 0.06
NEK3P51956 AC145423.3-201ENST00000615987 467 ntBASIC15.41■□□□□ 0.06
NEK3P51956 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.41■□□□□ 0.06
NEK3P51956 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
NEK3P51956 CICP20-201ENST00000443330 2801 ntBASIC15.41■□□□□ 0.06
NEK3P51956 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.41■□□□□ 0.06
NEK3P51956 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 AL928921.2-201ENST00000641325 2442 ntBASIC15.41■□□□□ 0.06
NEK3P51956 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NEK3P51956 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEK3P51956 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
NEK3P51956 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEK3P51956 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEK3P51956 INTS4P1-203ENST00000641008 3683 ntBASIC15.4■□□□□ 0.06
NEK3P51956 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NEK3P51956 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEK3P51956 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEK3P51956 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEK3P51956 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.4■□□□□ 0.06
NEK3P51956 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEK3P51956 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NEK3P51956 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NEK3P51956 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.4■□□□□ 0.06
NEK3P51956 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.4■□□□□ 0.06
NEK3P51956 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEK3P51956 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEK3P51956 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms