Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
VARSP26640 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.77□□□□□ -0.04
VARSP26640 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
VARSP26640 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
VARSP26640 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
VARSP26640 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.77□□□□□ -0.04
VARSP26640 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
VARSP26640 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
VARSP26640 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
VARSP26640 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VARSP26640 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
VARSP26640 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
VARSP26640 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VARSP26640 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.77□□□□□ -0.05
VARSP26640 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
VARSP26640 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
VARSP26640 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.77□□□□□ -0.05
VARSP26640 AC134915.1-201ENST00000426461 574 ntBASIC14.77□□□□□ -0.05
VARSP26640 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.77□□□□□ -0.05
VARSP26640 RPL13AP25-201ENST00000484130 612 ntBASIC14.77□□□□□ -0.05
VARSP26640 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.77□□□□□ -0.05
VARSP26640 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.77□□□□□ -0.05
VARSP26640 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.77□□□□□ -0.05
VARSP26640 COA4-204ENST00000541455 1038 ntTSL 5 BASIC14.77□□□□□ -0.05
VARSP26640 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
VARSP26640 AC092552.1-201ENST00000547243 906 ntBASIC14.77□□□□□ -0.05
VARSP26640 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.77□□□□□ -0.05
VARSP26640 AL359711.2-201ENST00000563105 872 ntBASIC14.77□□□□□ -0.05
VARSP26640 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
VARSP26640 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.77□□□□□ -0.05
VARSP26640 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VARSP26640 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.77□□□□□ -0.05
VARSP26640 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.77□□□□□ -0.05
VARSP26640 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VARSP26640 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.77□□□□□ -0.05
VARSP26640 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
VARSP26640 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
VARSP26640 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VARSP26640 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
VARSP26640 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
VARSP26640 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
VARSP26640 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.05
VARSP26640 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VARSP26640 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.76□□□□□ -0.05
VARSP26640 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
VARSP26640 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
VARSP26640 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 AC093525.8-201ENST00000624099 1342 ntBASIC14.76□□□□□ -0.05
VARSP26640 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.76□□□□□ -0.05
VARSP26640 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VARSP26640 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.76□□□□□ -0.05
VARSP26640 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
VARSP26640 AC092473.1-201ENST00000441098 221 ntBASIC14.76□□□□□ -0.05
VARSP26640 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.76□□□□□ -0.05
VARSP26640 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 AC092658.1-201ENST00000505836 891 ntBASIC14.76□□□□□ -0.05
VARSP26640 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.76□□□□□ -0.05
VARSP26640 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.76□□□□□ -0.05
VARSP26640 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.76□□□□□ -0.05
VARSP26640 WASH4P-201ENST00000564273 1246 ntBASIC14.76□□□□□ -0.05
VARSP26640 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.76□□□□□ -0.05
VARSP26640 AC120045.2-201ENST00000567334 178 ntBASIC14.76□□□□□ -0.05
VARSP26640 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.76□□□□□ -0.05
VARSP26640 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.76□□□□□ -0.05
VARSP26640 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.76□□□□□ -0.05
VARSP26640 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.76□□□□□ -0.05
VARSP26640 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.76□□□□□ -0.05
VARSP26640 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.76□□□□□ -0.05
VARSP26640 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.76□□□□□ -0.05
VARSP26640 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
VARSP26640 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
VARSP26640 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 310.6 ms