Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.15□□□□□ -0.3
ATF1P18846 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.15□□□□□ -0.3
ATF1P18846 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 AC087386.2-201ENST00000623212 4637 ntBASIC13.15□□□□□ -0.3
ATF1P18846 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
ATF1P18846 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
ATF1P18846 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
ATF1P18846 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
ATF1P18846 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.14□□□□□ -0.31
ATF1P18846 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.14□□□□□ -0.31
ATF1P18846 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.14□□□□□ -0.31
ATF1P18846 AC100757.3-201ENST00000622361 1406 ntBASIC13.14□□□□□ -0.31
ATF1P18846 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ATF1P18846 CICP16-201ENST00000502609 2813 ntBASIC13.14□□□□□ -0.31
ATF1P18846 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.14□□□□□ -0.31
ATF1P18846 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.14□□□□□ -0.31
ATF1P18846 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
ATF1P18846 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ATF1P18846 AC114501.2-201ENST00000439631 535 ntBASIC13.14□□□□□ -0.31
ATF1P18846 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.14□□□□□ -0.31
ATF1P18846 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.14□□□□□ -0.31
ATF1P18846 MEIS3P1-201ENST00000495167 958 ntBASIC13.14□□□□□ -0.31
ATF1P18846 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.14□□□□□ -0.31
ATF1P18846 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.14□□□□□ -0.31
ATF1P18846 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
ATF1P18846 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
ATF1P18846 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.14□□□□□ -0.31
ATF1P18846 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.14□□□□□ -0.31
ATF1P18846 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.14□□□□□ -0.31
ATF1P18846 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.14□□□□□ -0.31
ATF1P18846 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.14□□□□□ -0.31
ATF1P18846 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ATF1P18846 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
ATF1P18846 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.14□□□□□ -0.31
ATF1P18846 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATF1P18846 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.14□□□□□ -0.31
ATF1P18846 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 AC015818.8-201ENST00000587907 1519 ntBASIC13.13□□□□□ -0.31
ATF1P18846 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.13□□□□□ -0.31
ATF1P18846 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.13□□□□□ -0.31
ATF1P18846 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ATF1P18846 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ATF1P18846 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ATF1P18846 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
ATF1P18846 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ATF1P18846 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
ATF1P18846 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATF1P18846 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.13□□□□□ -0.31
ATF1P18846 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms