Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RPL7P3-201ENST00000441388 714 ntBASIC15.34■□□□□ 0.05
ERCC2P18074 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.34■□□□□ 0.05
ERCC2P18074 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.34■□□□□ 0.05
ERCC2P18074 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
ERCC2P18074 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.34■□□□□ 0.05
ERCC2P18074 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.34■□□□□ 0.05
ERCC2P18074 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.34■□□□□ 0.05
ERCC2P18074 RAB43P1-201ENST00000561790 589 ntBASIC15.34■□□□□ 0.05
ERCC2P18074 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.34■□□□□ 0.05
ERCC2P18074 RHOXF1P1-202ENST00000635473 501 ntBASIC15.34■□□□□ 0.05
ERCC2P18074 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.34■□□□□ 0.05
ERCC2P18074 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ERCC2P18074 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 MRPL37P1-201ENST00000592451 1337 ntBASIC15.34■□□□□ 0.05
ERCC2P18074 AL009178.2-201ENST00000597278 2719 ntBASIC15.34■□□□□ 0.05
ERCC2P18074 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.34■□□□□ 0.05
ERCC2P18074 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ERCC2P18074 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ERCC2P18074 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERCC2P18074 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.05
ERCC2P18074 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ERCC2P18074 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
ERCC2P18074 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ERCC2P18074 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ERCC2P18074 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ERCC2P18074 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
ERCC2P18074 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
ERCC2P18074 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ERCC2P18074 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.33■□□□□ 0.05
ERCC2P18074 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ERCC2P18074 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ERCC2P18074 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.33■□□□□ 0.04
ERCC2P18074 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC2P18074 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC2P18074 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.33■□□□□ 0.04
ERCC2P18074 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.33■□□□□ 0.04
ERCC2P18074 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.33■□□□□ 0.04
ERCC2P18074 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ERCC2P18074 AGGF1P1-201ENST00000509500 2073 ntBASIC15.33■□□□□ 0.04
ERCC2P18074 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC2P18074 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.33■□□□□ 0.04
ERCC2P18074 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC2P18074 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC2P18074 BOLA2P3-201ENST00000404566 256 ntBASIC15.33■□□□□ 0.04
ERCC2P18074 MIR1202-201ENST00000408529 83 ntBASIC15.33■□□□□ 0.04
ERCC2P18074 AC234783.1-201ENST00000441761 496 ntBASIC15.33■□□□□ 0.04
ERCC2P18074 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ERCC2P18074 TPT1P11-201ENST00000458482 498 ntBASIC15.33■□□□□ 0.04
ERCC2P18074 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.33■□□□□ 0.04
ERCC2P18074 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.33■□□□□ 0.04
ERCC2P18074 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC2P18074 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ERCC2P18074 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
ERCC2P18074 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.33■□□□□ 0.04
ERCC2P18074 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC2P18074 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.33■□□□□ 0.04
ERCC2P18074 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
ERCC2P18074 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.33■□□□□ 0.04
ERCC2P18074 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC2P18074 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.33■□□□□ 0.04
ERCC2P18074 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ERCC2P18074 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ERCC2P18074 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.32■□□□□ 0.04
ERCC2P18074 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.32■□□□□ 0.04
ERCC2P18074 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.32■□□□□ 0.04
ERCC2P18074 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC2P18074 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC2P18074 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC2P18074 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC2P18074 OR2I1P-210ENST00000642037 4691 ntBASIC15.32■□□□□ 0.04
ERCC2P18074 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC2P18074 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ERCC2P18074 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC2P18074 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC2P18074 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC2P18074 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.32■□□□□ 0.04
ERCC2P18074 AC004945.1-201ENST00000416738 983 ntBASIC15.32■□□□□ 0.04
ERCC2P18074 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.32■□□□□ 0.04
ERCC2P18074 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC2P18074 CTBP2P5-201ENST00000454986 1264 ntBASIC15.32■□□□□ 0.04
ERCC2P18074 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.32■□□□□ 0.04
ERCC2P18074 AC022447.6-201ENST00000515522 438 ntBASIC15.32■□□□□ 0.04
ERCC2P18074 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.32■□□□□ 0.04
ERCC2P18074 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ERCC2P18074 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
ERCC2P18074 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.32■□□□□ 0.04
ERCC2P18074 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.32■□□□□ 0.04
ERCC2P18074 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.32■□□□□ 0.04
ERCC2P18074 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.32■□□□□ 0.04
ERCC2P18074 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.32■□□□□ 0.04
ERCC2P18074 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ERCC2P18074 BX088702.1-201ENST00000610784 235 ntBASIC15.32■□□□□ 0.04
ERCC2P18074 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
ERCC2P18074 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC2P18074 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC2P18074 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms