Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.7■□□□□ 0.42
MBD4O95243 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MBD4O95243 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.7■□□□□ 0.42
MBD4O95243 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.69■□□□□ 0.42
MBD4O95243 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
MBD4O95243 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.69■□□□□ 0.42
MBD4O95243 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
MBD4O95243 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.69■□□□□ 0.42
MBD4O95243 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 NKAIN1P1-201ENST00000435754 582 ntBASIC17.69■□□□□ 0.42
MBD4O95243 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.69■□□□□ 0.42
MBD4O95243 KRT8P13-201ENST00000463294 1010 ntBASIC17.69■□□□□ 0.42
MBD4O95243 AC022494.1-201ENST00000466044 728 ntBASIC17.69■□□□□ 0.42
MBD4O95243 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.69■□□□□ 0.42
MBD4O95243 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
MBD4O95243 BNIP3P13-201ENST00000599968 566 ntBASIC17.69■□□□□ 0.42
MBD4O95243 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
MBD4O95243 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.69■□□□□ 0.42
MBD4O95243 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 AL590440.2-201ENST00000641973 1595 ntBASIC17.69■□□□□ 0.42
MBD4O95243 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
MBD4O95243 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MBD4O95243 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.69■□□□□ 0.42
MBD4O95243 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MBD4O95243 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.68■□□□□ 0.42
MBD4O95243 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.68■□□□□ 0.42
MBD4O95243 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD4O95243 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.68■□□□□ 0.42
MBD4O95243 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD4O95243 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD4O95243 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MBD4O95243 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.68■□□□□ 0.42
MBD4O95243 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.68■□□□□ 0.42
MBD4O95243 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
MBD4O95243 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD4O95243 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.68■□□□□ 0.42
MBD4O95243 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MBD4O95243 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.68■□□□□ 0.42
MBD4O95243 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MBD4O95243 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD4O95243 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.68■□□□□ 0.42
MBD4O95243 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MBD4O95243 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.68■□□□□ 0.42
MBD4O95243 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.68■□□□□ 0.42
MBD4O95243 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.68■□□□□ 0.42
MBD4O95243 MIR6720-201ENST00000611664 98 ntBASIC17.68■□□□□ 0.42
MBD4O95243 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.68■□□□□ 0.42
MBD4O95243 AL023803.2-201ENST00000620080 638 ntBASIC17.68■□□□□ 0.42
MBD4O95243 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.68■□□□□ 0.42
MBD4O95243 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.68■□□□□ 0.42
MBD4O95243 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
MBD4O95243 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
MBD4O95243 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD4O95243 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD4O95243 AC006504.5-208ENST00000588784 2401 ntBASIC17.68■□□□□ 0.42
MBD4O95243 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD4O95243 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.68■□□□□ 0.42
MBD4O95243 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
MBD4O95243 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.67■□□□□ 0.42
MBD4O95243 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MBD4O95243 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
MBD4O95243 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.67■□□□□ 0.42
MBD4O95243 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MBD4O95243 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.67■□□□□ 0.42
MBD4O95243 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.67■□□□□ 0.42
MBD4O95243 AC091804.1-201ENST00000486888 567 ntBASIC17.67■□□□□ 0.42
MBD4O95243 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
MBD4O95243 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
MBD4O95243 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.67■□□□□ 0.42
MBD4O95243 Z98259.2-201ENST00000641583 609 ntBASIC17.67■□□□□ 0.42
MBD4O95243 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
MBD4O95243 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
MBD4O95243 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
MBD4O95243 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms