Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCH4O75427 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCH4O75427 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCH4O75427 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
LRCH4O75427 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCH4O75427 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
LRCH4O75427 AC006504.5-208ENST00000588784 2401 ntBASIC15.48■□□□□ 0.07
LRCH4O75427 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
LRCH4O75427 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
LRCH4O75427 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCH4O75427 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.48■□□□□ 0.07
LRCH4O75427 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 AC012617.1-204ENST00000586340 2305 ntBASIC15.48■□□□□ 0.07
LRCH4O75427 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
LRCH4O75427 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
LRCH4O75427 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.47■□□□□ 0.07
LRCH4O75427 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LRCH4O75427 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCH4O75427 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
LRCH4O75427 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
LRCH4O75427 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
LRCH4O75427 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCH4O75427 AC139712.1-201ENST00000378256 1875 ntBASIC15.47■□□□□ 0.07
LRCH4O75427 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
LRCH4O75427 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
LRCH4O75427 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LRCH4O75427 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCH4O75427 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCH4O75427 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.47■□□□□ 0.07
LRCH4O75427 AC136759.1-202ENST00000530858 2194 ntBASIC15.47■□□□□ 0.07
LRCH4O75427 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
LRCH4O75427 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.47■□□□□ 0.07
LRCH4O75427 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCH4O75427 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.47■□□□□ 0.07
LRCH4O75427 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
LRCH4O75427 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCH4O75427 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.47■□□□□ 0.07
LRCH4O75427 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCH4O75427 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCH4O75427 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.47■□□□□ 0.07
LRCH4O75427 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRCH4O75427 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.47■□□□□ 0.07
LRCH4O75427 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.46■□□□□ 0.07
LRCH4O75427 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 GRK6P1-201ENST00000400595 1711 ntBASIC15.46■□□□□ 0.07
LRCH4O75427 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.46■□□□□ 0.07
LRCH4O75427 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 AL590440.2-201ENST00000641973 1595 ntBASIC15.46■□□□□ 0.07
LRCH4O75427 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.46■□□□□ 0.07
LRCH4O75427 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LRCH4O75427 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
LRCH4O75427 AC215219.1-201ENST00000400706 1817 ntBASIC15.46■□□□□ 0.07
LRCH4O75427 AC090505.1-201ENST00000430515 1834 ntBASIC15.46■□□□□ 0.07
LRCH4O75427 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.46■□□□□ 0.07
LRCH4O75427 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.46■□□□□ 0.07
LRCH4O75427 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRCH4O75427 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.46■□□□□ 0.07
LRCH4O75427 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms