Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.36□□□□□ -0.27
ZIC3O60481 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
ZIC3O60481 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ZIC3O60481 AC139712.1-201ENST00000378256 1875 ntBASIC13.36□□□□□ -0.27
ZIC3O60481 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
ZIC3O60481 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.35□□□□□ -0.27
ZIC3O60481 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.35□□□□□ -0.27
ZIC3O60481 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ZIC3O60481 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.35□□□□□ -0.27
ZIC3O60481 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.35□□□□□ -0.27
ZIC3O60481 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
ZIC3O60481 KLF2P1-201ENST00000447438 1042 ntBASIC13.35□□□□□ -0.27
ZIC3O60481 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.35□□□□□ -0.27
ZIC3O60481 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.35□□□□□ -0.27
ZIC3O60481 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.35□□□□□ -0.27
ZIC3O60481 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.35□□□□□ -0.27
ZIC3O60481 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.35□□□□□ -0.27
ZIC3O60481 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.35□□□□□ -0.27
ZIC3O60481 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.35□□□□□ -0.27
ZIC3O60481 AC100827.2-201ENST00000563214 1194 ntBASIC13.35□□□□□ -0.27
ZIC3O60481 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.35□□□□□ -0.27
ZIC3O60481 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
ZIC3O60481 AL022328.3-201ENST00000607943 679 ntBASIC13.35□□□□□ -0.27
ZIC3O60481 AC007663.3-201ENST00000609632 465 ntBASIC13.35□□□□□ -0.27
ZIC3O60481 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.35□□□□□ -0.27
ZIC3O60481 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC13.35□□□□□ -0.27
ZIC3O60481 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ZIC3O60481 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.35□□□□□ -0.27
ZIC3O60481 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ZIC3O60481 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 AC126755.1-201ENST00000525846 6405 ntBASIC13.35□□□□□ -0.27
ZIC3O60481 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ZIC3O60481 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.35□□□□□ -0.27
ZIC3O60481 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ZIC3O60481 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ZIC3O60481 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 AC244394.1-201ENST00000435000 1665 ntBASIC13.34□□□□□ -0.27
ZIC3O60481 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
ZIC3O60481 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 KRT8P29-201ENST00000420409 1371 ntBASIC13.34□□□□□ -0.27
ZIC3O60481 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 AL590440.2-201ENST00000641973 1595 ntBASIC13.34□□□□□ -0.27
ZIC3O60481 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.34□□□□□ -0.27
ZIC3O60481 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ZIC3O60481 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC13.34□□□□□ -0.27
ZIC3O60481 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.34□□□□□ -0.27
ZIC3O60481 AC006033.1-201ENST00000440505 426 ntBASIC13.34□□□□□ -0.27
ZIC3O60481 AC021723.1-201ENST00000486306 515 ntBASIC13.34□□□□□ -0.27
ZIC3O60481 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 ZNF767P-206ENST00000513792 565 ntBASIC13.34□□□□□ -0.27
ZIC3O60481 AC126915.1-201ENST00000522847 1038 ntBASIC13.34□□□□□ -0.27
ZIC3O60481 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
ZIC3O60481 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
ZIC3O60481 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC13.34□□□□□ -0.27
ZIC3O60481 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.34□□□□□ -0.27
ZIC3O60481 AC005324.6-201ENST00000587972 613 ntBASIC13.34□□□□□ -0.27
ZIC3O60481 DIO1-215ENST00000610607 796 ntTSL 5 BASIC13.34□□□□□ -0.27
ZIC3O60481 AL023803.2-201ENST00000620080 638 ntBASIC13.34□□□□□ -0.27
ZIC3O60481 AC022748.3-201ENST00000621828 275 ntBASIC13.34□□□□□ -0.27
ZIC3O60481 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ZIC3O60481 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
ZIC3O60481 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 533.6 ms