Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 POM121L8P-201ENST00000417732 1281 ntBASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 POM121L9P-203ENST00000441984 1285 ntBASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 PPY2P-201ENST00000582808 702 ntBASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 AL096828.3-201ENST00000615354 462 ntBASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 AL360270.3-201ENST00000609118 1348 ntBASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NPIPA3F8WFD2 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 KRT8P4-201ENST00000509735 1454 ntBASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 AL391280.1-201ENST00000506969 1062 ntBASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NPIPA3F8WFD2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.6□□□□□ -0.23
NPIPA3F8WFD2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms