Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.81■□□□□ 0.12
SPCS1Q9Y6A9 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS1Q9Y6A9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS1Q9Y6A9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.81■□□□□ 0.12
SPCS1Q9Y6A9 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SPCS1Q9Y6A9 AC007952.6-201ENST00000573168 2673 ntBASIC15.81■□□□□ 0.12
SPCS1Q9Y6A9 AC003957.1-201ENST00000625108 2673 ntBASIC15.81■□□□□ 0.12
SPCS1Q9Y6A9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SPCS1Q9Y6A9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC15.8■□□□□ 0.12
SPCS1Q9Y6A9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.8■□□□□ 0.12
SPCS1Q9Y6A9 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SPCS1Q9Y6A9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SPCS1Q9Y6A9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SPCS1Q9Y6A9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.8■□□□□ 0.12
SPCS1Q9Y6A9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC15.8■□□□□ 0.12
SPCS1Q9Y6A9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPCS1Q9Y6A9 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SPCS1Q9Y6A9 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SPCS1Q9Y6A9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPCS1Q9Y6A9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPCS1Q9Y6A9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.79■□□□□ 0.12
SPCS1Q9Y6A9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPCS1Q9Y6A9 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SPCS1Q9Y6A9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPCS1Q9Y6A9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SPCS1Q9Y6A9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.79■□□□□ 0.12
SPCS1Q9Y6A9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPCS1Q9Y6A9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPCS1Q9Y6A9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPCS1Q9Y6A9 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPCS1Q9Y6A9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPCS1Q9Y6A9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.78■□□□□ 0.12
SPCS1Q9Y6A9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPCS1Q9Y6A9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPCS1Q9Y6A9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPCS1Q9Y6A9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SPCS1Q9Y6A9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPCS1Q9Y6A9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SPCS1Q9Y6A9 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SPCS1Q9Y6A9 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.77■□□□□ 0.12
SPCS1Q9Y6A9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPCS1Q9Y6A9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.77■□□□□ 0.12
SPCS1Q9Y6A9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SPCS1Q9Y6A9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPCS1Q9Y6A9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPCS1Q9Y6A9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPCS1Q9Y6A9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SPCS1Q9Y6A9 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SPCS1Q9Y6A9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SPCS1Q9Y6A9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SPCS1Q9Y6A9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SPCS1Q9Y6A9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SPCS1Q9Y6A9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SPCS1Q9Y6A9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.75■□□□□ 0.11
SPCS1Q9Y6A9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.75■□□□□ 0.11
SPCS1Q9Y6A9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SPCS1Q9Y6A9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SPCS1Q9Y6A9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPCS1Q9Y6A9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.75■□□□□ 0.11
SPCS1Q9Y6A9 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPCS1Q9Y6A9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.75■□□□□ 0.11
SPCS1Q9Y6A9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.75■□□□□ 0.11
SPCS1Q9Y6A9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPCS1Q9Y6A9 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SPCS1Q9Y6A9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPCS1Q9Y6A9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC15.74■□□□□ 0.11
SPCS1Q9Y6A9 AC127502.1-201ENST00000399971 1502 ntBASIC15.74■□□□□ 0.11
SPCS1Q9Y6A9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SPCS1Q9Y6A9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SPCS1Q9Y6A9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.74■□□□□ 0.11
SPCS1Q9Y6A9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC15.74■□□□□ 0.11
SPCS1Q9Y6A9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPCS1Q9Y6A9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SPCS1Q9Y6A9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPCS1Q9Y6A9 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SPCS1Q9Y6A9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SPCS1Q9Y6A9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SPCS1Q9Y6A9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
SPCS1Q9Y6A9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SPCS1Q9Y6A9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms