Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPH3AQ9Y2J0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPH3AQ9Y2J0 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.88■□□□□ 0.93
RPH3AQ9Y2J0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPH3AQ9Y2J0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPH3AQ9Y2J0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 AC008406.3-201ENST00000620001 1374 ntBASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 AL022069.1-201ENST00000568025 1636 ntBASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPH3AQ9Y2J0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPH3AQ9Y2J0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPH3AQ9Y2J0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPH3AQ9Y2J0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPH3AQ9Y2J0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPH3AQ9Y2J0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPH3AQ9Y2J0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPH3AQ9Y2J0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RPH3AQ9Y2J0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPH3AQ9Y2J0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.85■□□□□ 0.93
RPH3AQ9Y2J0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPH3AQ9Y2J0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.85■□□□□ 0.93
RPH3AQ9Y2J0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPH3AQ9Y2J0 LINC01124-201ENST00000409786 2117 ntBASIC20.85■□□□□ 0.93
RPH3AQ9Y2J0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.85■□□□□ 0.93
RPH3AQ9Y2J0 AC004448.1-201ENST00000458332 883 ntBASIC20.85■□□□□ 0.93
RPH3AQ9Y2J0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.85■□□□□ 0.93
RPH3AQ9Y2J0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPH3AQ9Y2J0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPH3AQ9Y2J0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RPH3AQ9Y2J0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPH3AQ9Y2J0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.84■□□□□ 0.93
RPH3AQ9Y2J0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RPH3AQ9Y2J0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPH3AQ9Y2J0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RPH3AQ9Y2J0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPH3AQ9Y2J0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPH3AQ9Y2J0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RPH3AQ9Y2J0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.84■□□□□ 0.93
RPH3AQ9Y2J0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPH3AQ9Y2J0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPH3AQ9Y2J0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RPH3AQ9Y2J0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPH3AQ9Y2J0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RPH3AQ9Y2J0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPH3AQ9Y2J0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPH3AQ9Y2J0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPH3AQ9Y2J0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.83■□□□□ 0.93
RPH3AQ9Y2J0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPH3AQ9Y2J0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPH3AQ9Y2J0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.83■□□□□ 0.93
RPH3AQ9Y2J0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPH3AQ9Y2J0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPH3AQ9Y2J0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RPH3AQ9Y2J0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.83■□□□□ 0.92
RPH3AQ9Y2J0 AC093323.1-202ENST00000635031 2045 ntBASIC20.83■□□□□ 0.92
RPH3AQ9Y2J0 LINC00543-201ENST00000567234 1845 ntBASIC20.83■□□□□ 0.92
RPH3AQ9Y2J0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPH3AQ9Y2J0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPH3AQ9Y2J0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPH3AQ9Y2J0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RPH3AQ9Y2J0 AC141586.4-201ENST00000624558 1573 ntBASIC20.82■□□□□ 0.92
RPH3AQ9Y2J0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RPH3AQ9Y2J0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPH3AQ9Y2J0 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.82■□□□□ 0.92
RPH3AQ9Y2J0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPH3AQ9Y2J0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.82■□□□□ 0.92
RPH3AQ9Y2J0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.82■□□□□ 0.92
RPH3AQ9Y2J0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPH3AQ9Y2J0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RPH3AQ9Y2J0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPH3AQ9Y2J0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPH3AQ9Y2J0 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.81■□□□□ 0.92
RPH3AQ9Y2J0 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPH3AQ9Y2J0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPH3AQ9Y2J0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RPH3AQ9Y2J0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.81■□□□□ 0.92
RPH3AQ9Y2J0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPH3AQ9Y2J0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.81■□□□□ 0.92
RPH3AQ9Y2J0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.81■□□□□ 0.92
RPH3AQ9Y2J0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RPH3AQ9Y2J0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.8■□□□□ 0.92
RPH3AQ9Y2J0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.8■□□□□ 0.92
RPH3AQ9Y2J0 MIR6724-1-201ENST00000616420 92 ntBASIC20.8■□□□□ 0.92
RPH3AQ9Y2J0 MIR6724-2-201ENST00000616483 92 ntBASIC20.8■□□□□ 0.92
RPH3AQ9Y2J0 MIR6724-4-201ENST00000617390 92 ntBASIC20.8■□□□□ 0.92
RPH3AQ9Y2J0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.8■□□□□ 0.92
RPH3AQ9Y2J0 MIR6724-3-201ENST00000622482 92 ntBASIC20.8■□□□□ 0.92
RPH3AQ9Y2J0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms