Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
ERGIC3Q9Y282 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ERGIC3Q9Y282 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.8■□□□□ 0.92
ERGIC3Q9Y282 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.8■□□□□ 0.92
ERGIC3Q9Y282 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ERGIC3Q9Y282 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERGIC3Q9Y282 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERGIC3Q9Y282 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ERGIC3Q9Y282 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.79■□□□□ 0.92
ERGIC3Q9Y282 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.79■□□□□ 0.92
ERGIC3Q9Y282 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ERGIC3Q9Y282 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.79■□□□□ 0.92
ERGIC3Q9Y282 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ERGIC3Q9Y282 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ERGIC3Q9Y282 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ERGIC3Q9Y282 DUSP8P3-201ENST00000399571 1760 ntBASIC20.78■□□□□ 0.92
ERGIC3Q9Y282 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ERGIC3Q9Y282 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.78■□□□□ 0.92
ERGIC3Q9Y282 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ERGIC3Q9Y282 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ERGIC3Q9Y282 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ERGIC3Q9Y282 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ERGIC3Q9Y282 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERGIC3Q9Y282 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERGIC3Q9Y282 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERGIC3Q9Y282 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERGIC3Q9Y282 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERGIC3Q9Y282 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERGIC3Q9Y282 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ERGIC3Q9Y282 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.77■□□□□ 0.92
ERGIC3Q9Y282 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
ERGIC3Q9Y282 FOXO3B-201ENST00000395675 1928 ntBASIC20.76■□□□□ 0.91
ERGIC3Q9Y282 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ERGIC3Q9Y282 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
ERGIC3Q9Y282 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERGIC3Q9Y282 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ERGIC3Q9Y282 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.76■□□□□ 0.91
ERGIC3Q9Y282 AL137060.1-201ENST00000618151 2648 ntBASIC20.76■□□□□ 0.91
ERGIC3Q9Y282 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ERGIC3Q9Y282 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
ERGIC3Q9Y282 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.76■□□□□ 0.91
ERGIC3Q9Y282 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.76■□□□□ 0.91
ERGIC3Q9Y282 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ERGIC3Q9Y282 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ERGIC3Q9Y282 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ERGIC3Q9Y282 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ERGIC3Q9Y282 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 DUX4L11-201ENST00000611504 1267 ntBASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 DUX4L12-201ENST00000614593 1267 ntBASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 DUX4L14-201ENST00000621227 1267 ntBASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ERGIC3Q9Y282 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ERGIC3Q9Y282 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.74■□□□□ 0.91
ERGIC3Q9Y282 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.74■□□□□ 0.91
ERGIC3Q9Y282 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERGIC3Q9Y282 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ERGIC3Q9Y282 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
ERGIC3Q9Y282 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ERGIC3Q9Y282 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ERGIC3Q9Y282 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ERGIC3Q9Y282 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ERGIC3Q9Y282 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ERGIC3Q9Y282 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERGIC3Q9Y282 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERGIC3Q9Y282 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ERGIC3Q9Y282 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.73■□□□□ 0.91
ERGIC3Q9Y282 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.73■□□□□ 0.91
ERGIC3Q9Y282 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERGIC3Q9Y282 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERGIC3Q9Y282 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ERGIC3Q9Y282 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ERGIC3Q9Y282 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ERGIC3Q9Y282 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERGIC3Q9Y282 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ERGIC3Q9Y282 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.72■□□□□ 0.91
ERGIC3Q9Y282 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ERGIC3Q9Y282 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERGIC3Q9Y282 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ERGIC3Q9Y282 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ERGIC3Q9Y282 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
ERGIC3Q9Y282 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms