Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
HPF1Q9NWY4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPF1Q9NWY4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.16■□□□□ 0.98
HPF1Q9NWY4 HLA-L-211ENST00000482052 1765 ntBASIC21.15■□□□□ 0.98
HPF1Q9NWY4 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPF1Q9NWY4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPF1Q9NWY4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HPF1Q9NWY4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.15■□□□□ 0.98
HPF1Q9NWY4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.15■□□□□ 0.98
HPF1Q9NWY4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
HPF1Q9NWY4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HPF1Q9NWY4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HPF1Q9NWY4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HPF1Q9NWY4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HPF1Q9NWY4 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HPF1Q9NWY4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HPF1Q9NWY4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPF1Q9NWY4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPF1Q9NWY4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.13■□□□□ 0.97
HPF1Q9NWY4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPF1Q9NWY4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPF1Q9NWY4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HPF1Q9NWY4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HPF1Q9NWY4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.13■□□□□ 0.97
HPF1Q9NWY4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.13■□□□□ 0.97
HPF1Q9NWY4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPF1Q9NWY4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPF1Q9NWY4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HPF1Q9NWY4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.12■□□□□ 0.97
HPF1Q9NWY4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HPF1Q9NWY4 AC142381.3-201ENST00000568208 1670 ntBASIC21.12■□□□□ 0.97
HPF1Q9NWY4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.12■□□□□ 0.97
HPF1Q9NWY4 AC005703.6-201ENST00000623265 1329 ntBASIC21.12■□□□□ 0.97
HPF1Q9NWY4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HPF1Q9NWY4 AC131281.2-201ENST00000520478 145 ntBASIC21.12■□□□□ 0.97
HPF1Q9NWY4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HPF1Q9NWY4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HPF1Q9NWY4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HPF1Q9NWY4 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HPF1Q9NWY4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
HPF1Q9NWY4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HPF1Q9NWY4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HPF1Q9NWY4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HPF1Q9NWY4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.1■□□□□ 0.97
HPF1Q9NWY4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HPF1Q9NWY4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.1■□□□□ 0.97
HPF1Q9NWY4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.1■□□□□ 0.97
HPF1Q9NWY4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.1■□□□□ 0.97
HPF1Q9NWY4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HPF1Q9NWY4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.09■□□□□ 0.97
HPF1Q9NWY4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HPF1Q9NWY4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.09■□□□□ 0.97
HPF1Q9NWY4 AL161729.1-201ENST00000604104 1402 ntBASIC21.09■□□□□ 0.97
HPF1Q9NWY4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HPF1Q9NWY4 AC020928.2-201ENST00000588717 2197 ntBASIC21.09■□□□□ 0.97
HPF1Q9NWY4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.08■□□□□ 0.97
HPF1Q9NWY4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HPF1Q9NWY4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HPF1Q9NWY4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.08■□□□□ 0.97
HPF1Q9NWY4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.08■□□□□ 0.97
HPF1Q9NWY4 AL136116.3-201ENST00000402907 1138 ntBASIC21.08■□□□□ 0.97
HPF1Q9NWY4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HPF1Q9NWY4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
HPF1Q9NWY4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HPF1Q9NWY4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
HPF1Q9NWY4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HPF1Q9NWY4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms