Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 MIR4787-201ENST00000607364 84 ntBASIC21.06■□□□□ 0.96
TM9SF2Q99805 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.06■□□□□ 0.96
TM9SF2Q99805 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM9SF2Q99805 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM9SF2Q99805 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM9SF2Q99805 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM9SF2Q99805 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TM9SF2Q99805 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM9SF2Q99805 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TM9SF2Q99805 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM9SF2Q99805 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM9SF2Q99805 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.05■□□□□ 0.96
TM9SF2Q99805 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.05■□□□□ 0.96
TM9SF2Q99805 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM9SF2Q99805 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM9SF2Q99805 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TM9SF2Q99805 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.04■□□□□ 0.96
TM9SF2Q99805 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM9SF2Q99805 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TM9SF2Q99805 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM9SF2Q99805 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TM9SF2Q99805 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TM9SF2Q99805 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM9SF2Q99805 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TM9SF2Q99805 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM9SF2Q99805 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.04■□□□□ 0.96
TM9SF2Q99805 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.04■□□□□ 0.96
TM9SF2Q99805 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TM9SF2Q99805 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.04■□□□□ 0.96
TM9SF2Q99805 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TM9SF2Q99805 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.03■□□□□ 0.96
TM9SF2Q99805 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM9SF2Q99805 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM9SF2Q99805 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.03■□□□□ 0.96
TM9SF2Q99805 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.03■□□□□ 0.96
TM9SF2Q99805 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.03■□□□□ 0.96
TM9SF2Q99805 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.03■□□□□ 0.96
TM9SF2Q99805 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TM9SF2Q99805 MIR4281-201ENST00000580852 62 ntBASIC21.03■□□□□ 0.96
TM9SF2Q99805 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.03■□□□□ 0.96
TM9SF2Q99805 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM9SF2Q99805 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM9SF2Q99805 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM9SF2Q99805 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TM9SF2Q99805 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TM9SF2Q99805 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM9SF2Q99805 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM9SF2Q99805 FOXO3B-201ENST00000395675 1928 ntBASIC21.02■□□□□ 0.96
TM9SF2Q99805 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TM9SF2Q99805 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.02■□□□□ 0.96
TM9SF2Q99805 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.02■□□□□ 0.96
TM9SF2Q99805 AL356441.2-201ENST00000443009 864 ntBASIC21.02■□□□□ 0.96
TM9SF2Q99805 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.02■□□□□ 0.95
TM9SF2Q99805 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TM9SF2Q99805 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
TM9SF2Q99805 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
TM9SF2Q99805 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TM9SF2Q99805 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.01■□□□□ 0.95
TM9SF2Q99805 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TM9SF2Q99805 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TM9SF2Q99805 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.01■□□□□ 0.95
TM9SF2Q99805 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF2Q99805 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF2Q99805 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
TM9SF2Q99805 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.01■□□□□ 0.95
TM9SF2Q99805 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.01■□□□□ 0.95
TM9SF2Q99805 AC131212.1-201ENST00000613771 668 ntBASIC21.01■□□□□ 0.95
TM9SF2Q99805 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.01■□□□□ 0.95
TM9SF2Q99805 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TM9SF2Q99805 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TM9SF2Q99805 AC021242.3-201ENST00000607598 1377 ntBASIC21■□□□□ 0.95
TM9SF2Q99805 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TM9SF2Q99805 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF2Q99805 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF2Q99805 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF2Q99805 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
TM9SF2Q99805 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.99■□□□□ 0.95
TM9SF2Q99805 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.99■□□□□ 0.95
TM9SF2Q99805 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.99■□□□□ 0.95
TM9SF2Q99805 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TM9SF2Q99805 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TM9SF2Q99805 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TM9SF2Q99805 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.99■□□□□ 0.95
TM9SF2Q99805 DUSP8P5-201ENST00000422884 1815 ntBASIC20.99■□□□□ 0.95
TM9SF2Q99805 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
TM9SF2Q99805 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF2Q99805 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.98■□□□□ 0.95
TM9SF2Q99805 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TM9SF2Q99805 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM9SF2Q99805 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM9SF2Q99805 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM9SF2Q99805 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM9SF2Q99805 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM9SF2Q99805 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM9SF2Q99805 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM9SF2Q99805 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
TM9SF2Q99805 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TM9SF2Q99805 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.97■□□□□ 0.95
TM9SF2Q99805 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.97■□□□□ 0.95
TM9SF2Q99805 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms