Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 MIR6724-2-201ENST00000616483 92 ntBASIC22.9■■□□□ 1.26
LYSMD1Q96S90 MIR6724-4-201ENST00000617390 92 ntBASIC22.9■■□□□ 1.26
LYSMD1Q96S90 MIR6724-3-201ENST00000622482 92 ntBASIC22.9■■□□□ 1.26
LYSMD1Q96S90 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LYSMD1Q96S90 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.9■■□□□ 1.26
LYSMD1Q96S90 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.9■■□□□ 1.26
LYSMD1Q96S90 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.9■■□□□ 1.26
LYSMD1Q96S90 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
LYSMD1Q96S90 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.9■■□□□ 1.26
LYSMD1Q96S90 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
LYSMD1Q96S90 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
LYSMD1Q96S90 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.89■■□□□ 1.26
LYSMD1Q96S90 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.89■■□□□ 1.26
LYSMD1Q96S90 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
LYSMD1Q96S90 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.89■■□□□ 1.26
LYSMD1Q96S90 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.89■■□□□ 1.26
LYSMD1Q96S90 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
LYSMD1Q96S90 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.89■■□□□ 1.25
LYSMD1Q96S90 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.89■■□□□ 1.25
LYSMD1Q96S90 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
LYSMD1Q96S90 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
LYSMD1Q96S90 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
LYSMD1Q96S90 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.88■■□□□ 1.25
LYSMD1Q96S90 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.88■■□□□ 1.25
LYSMD1Q96S90 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC22.88■■□□□ 1.25
LYSMD1Q96S90 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.88■■□□□ 1.25
LYSMD1Q96S90 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.88■■□□□ 1.25
LYSMD1Q96S90 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LYSMD1Q96S90 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LYSMD1Q96S90 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.87■■□□□ 1.25
LYSMD1Q96S90 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
LYSMD1Q96S90 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LYSMD1Q96S90 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.87■■□□□ 1.25
LYSMD1Q96S90 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.87■■□□□ 1.25
LYSMD1Q96S90 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LYSMD1Q96S90 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LYSMD1Q96S90 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
LYSMD1Q96S90 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LYSMD1Q96S90 AC005703.6-201ENST00000623265 1329 ntBASIC22.86■■□□□ 1.25
LYSMD1Q96S90 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LYSMD1Q96S90 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
LYSMD1Q96S90 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
LYSMD1Q96S90 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.86■■□□□ 1.25
LYSMD1Q96S90 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LYSMD1Q96S90 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
LYSMD1Q96S90 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LYSMD1Q96S90 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LYSMD1Q96S90 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.85■■□□□ 1.25
LYSMD1Q96S90 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LYSMD1Q96S90 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.85■■□□□ 1.25
LYSMD1Q96S90 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
LYSMD1Q96S90 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LYSMD1Q96S90 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LYSMD1Q96S90 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.84■■□□□ 1.25
LYSMD1Q96S90 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LYSMD1Q96S90 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LYSMD1Q96S90 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LYSMD1Q96S90 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LYSMD1Q96S90 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LYSMD1Q96S90 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LYSMD1Q96S90 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LYSMD1Q96S90 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LYSMD1Q96S90 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LYSMD1Q96S90 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LYSMD1Q96S90 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.83■■□□□ 1.25
LYSMD1Q96S90 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
LYSMD1Q96S90 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
LYSMD1Q96S90 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
LYSMD1Q96S90 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LYSMD1Q96S90 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LYSMD1Q96S90 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
LYSMD1Q96S90 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
LYSMD1Q96S90 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LYSMD1Q96S90 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LYSMD1Q96S90 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.82■■□□□ 1.24
LYSMD1Q96S90 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LYSMD1Q96S90 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LYSMD1Q96S90 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LYSMD1Q96S90 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
LYSMD1Q96S90 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LYSMD1Q96S90 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.81■■□□□ 1.24
LYSMD1Q96S90 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.81■■□□□ 1.24
LYSMD1Q96S90 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.81■■□□□ 1.24
LYSMD1Q96S90 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LYSMD1Q96S90 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LYSMD1Q96S90 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LYSMD1Q96S90 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
LYSMD1Q96S90 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
LYSMD1Q96S90 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
LYSMD1Q96S90 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.8■■□□□ 1.24
LYSMD1Q96S90 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.8■■□□□ 1.24
LYSMD1Q96S90 MIR3621-201ENST00000580529 85 ntBASIC22.8■■□□□ 1.24
LYSMD1Q96S90 AL117332.1-201ENST00000622628 974 ntBASIC22.8■■□□□ 1.24
LYSMD1Q96S90 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
LYSMD1Q96S90 AC093323.1-202ENST00000635031 2045 ntBASIC22.8■■□□□ 1.24
LYSMD1Q96S90 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.8■■□□□ 1.24
LYSMD1Q96S90 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
LYSMD1Q96S90 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
LYSMD1Q96S90 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.79■■□□□ 1.24
LYSMD1Q96S90 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms