Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL21A1Q96P44 AC120024.1-201ENST00000562672 995 ntBASIC21.56■■□□□ 1.04
COL21A1Q96P44 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.56■■□□□ 1.04
COL21A1Q96P44 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
COL21A1Q96P44 AL031848.2-201ENST00000607670 837 ntBASIC21.55■■□□□ 1.04
COL21A1Q96P44 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL21A1Q96P44 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.55■■□□□ 1.04
COL21A1Q96P44 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
COL21A1Q96P44 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
COL21A1Q96P44 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL21A1Q96P44 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL21A1Q96P44 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL21A1Q96P44 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.54■■□□□ 1.04
COL21A1Q96P44 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.53■■□□□ 1.04
COL21A1Q96P44 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.53■■□□□ 1.04
COL21A1Q96P44 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.53■■□□□ 1.04
COL21A1Q96P44 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL21A1Q96P44 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL21A1Q96P44 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL21A1Q96P44 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL21A1Q96P44 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL21A1Q96P44 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
COL21A1Q96P44 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
COL21A1Q96P44 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
COL21A1Q96P44 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
COL21A1Q96P44 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL21A1Q96P44 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL21A1Q96P44 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL21A1Q96P44 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
COL21A1Q96P44 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL21A1Q96P44 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL21A1Q96P44 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL21A1Q96P44 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL21A1Q96P44 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.51■■□□□ 1.03
COL21A1Q96P44 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.51■■□□□ 1.03
COL21A1Q96P44 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.51■■□□□ 1.03
COL21A1Q96P44 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL21A1Q96P44 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL21A1Q96P44 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
COL21A1Q96P44 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL21A1Q96P44 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
COL21A1Q96P44 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL21A1Q96P44 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
COL21A1Q96P44 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL21A1Q96P44 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.5■■□□□ 1.03
COL21A1Q96P44 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL21A1Q96P44 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL21A1Q96P44 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL21A1Q96P44 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.49■■□□□ 1.03
COL21A1Q96P44 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL21A1Q96P44 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL21A1Q96P44 DUSP8P5-201ENST00000422884 1815 ntBASIC21.48■■□□□ 1.03
COL21A1Q96P44 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL21A1Q96P44 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
COL21A1Q96P44 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.48■■□□□ 1.03
COL21A1Q96P44 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
COL21A1Q96P44 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.47■■□□□ 1.03
COL21A1Q96P44 MIR4281-201ENST00000580852 62 ntBASIC21.47■■□□□ 1.03
COL21A1Q96P44 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.47■■□□□ 1.03
COL21A1Q96P44 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.47■■□□□ 1.03
COL21A1Q96P44 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.46■■□□□ 1.03
COL21A1Q96P44 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL21A1Q96P44 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.46■■□□□ 1.03
COL21A1Q96P44 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL21A1Q96P44 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL21A1Q96P44 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL21A1Q96P44 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.46■■□□□ 1.03
COL21A1Q96P44 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.46■■□□□ 1.03
COL21A1Q96P44 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL21A1Q96P44 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL21A1Q96P44 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.46■■□□□ 1.03
COL21A1Q96P44 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL21A1Q96P44 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL21A1Q96P44 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
COL21A1Q96P44 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL21A1Q96P44 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
COL21A1Q96P44 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.45■■□□□ 1.02
COL21A1Q96P44 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.45■■□□□ 1.02
COL21A1Q96P44 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL21A1Q96P44 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL21A1Q96P44 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
COL21A1Q96P44 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL21A1Q96P44 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL21A1Q96P44 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
COL21A1Q96P44 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL21A1Q96P44 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL21A1Q96P44 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL21A1Q96P44 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.44■■□□□ 1.02
COL21A1Q96P44 AL451085.2-201ENST00000605085 799 ntBASIC21.44■■□□□ 1.02
COL21A1Q96P44 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL21A1Q96P44 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL21A1Q96P44 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
COL21A1Q96P44 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.44■■□□□ 1.02
COL21A1Q96P44 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL21A1Q96P44 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL21A1Q96P44 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL21A1Q96P44 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
COL21A1Q96P44 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.43■■□□□ 1.02
COL21A1Q96P44 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL21A1Q96P44 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms