Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PRICKLE1Q96MT3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.7■■□□□ 1.38
PRICKLE1Q96MT3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.69■■□□□ 1.38
PRICKLE1Q96MT3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRICKLE1Q96MT3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRICKLE1Q96MT3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
PRICKLE1Q96MT3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.69■■□□□ 1.38
PRICKLE1Q96MT3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PRICKLE1Q96MT3 MIR3621-201ENST00000580529 85 ntBASIC23.69■■□□□ 1.38
PRICKLE1Q96MT3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.69■■□□□ 1.38
PRICKLE1Q96MT3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.69■■□□□ 1.38
PRICKLE1Q96MT3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PRICKLE1Q96MT3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PRICKLE1Q96MT3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRICKLE1Q96MT3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
PRICKLE1Q96MT3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
PRICKLE1Q96MT3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.68■■□□□ 1.38
PRICKLE1Q96MT3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.68■■□□□ 1.38
PRICKLE1Q96MT3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.68■■□□□ 1.38
PRICKLE1Q96MT3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PRICKLE1Q96MT3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PRICKLE1Q96MT3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRICKLE1Q96MT3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
PRICKLE1Q96MT3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRICKLE1Q96MT3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PRICKLE1Q96MT3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PRICKLE1Q96MT3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PRICKLE1Q96MT3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PRICKLE1Q96MT3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PRICKLE1Q96MT3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.67■■□□□ 1.38
PRICKLE1Q96MT3 AC131281.2-201ENST00000520478 145 ntBASIC23.67■■□□□ 1.38
PRICKLE1Q96MT3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.67■■□□□ 1.38
PRICKLE1Q96MT3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PRICKLE1Q96MT3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PRICKLE1Q96MT3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PRICKLE1Q96MT3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
PRICKLE1Q96MT3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
PRICKLE1Q96MT3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.66■■□□□ 1.38
PRICKLE1Q96MT3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.66■■□□□ 1.38
PRICKLE1Q96MT3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
PRICKLE1Q96MT3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.65■■□□□ 1.38
PRICKLE1Q96MT3 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.65■■□□□ 1.38
PRICKLE1Q96MT3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PRICKLE1Q96MT3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.64■■□□□ 1.37
PRICKLE1Q96MT3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.64■■□□□ 1.37
PRICKLE1Q96MT3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.64■■□□□ 1.37
PRICKLE1Q96MT3 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.64■■□□□ 1.37
PRICKLE1Q96MT3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.64■■□□□ 1.37
PRICKLE1Q96MT3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.64■■□□□ 1.37
PRICKLE1Q96MT3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.64■■□□□ 1.37
PRICKLE1Q96MT3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PRICKLE1Q96MT3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
PRICKLE1Q96MT3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
PRICKLE1Q96MT3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.64■■□□□ 1.37
PRICKLE1Q96MT3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PRICKLE1Q96MT3 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.63■■□□□ 1.37
PRICKLE1Q96MT3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PRICKLE1Q96MT3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PRICKLE1Q96MT3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PRICKLE1Q96MT3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PRICKLE1Q96MT3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PRICKLE1Q96MT3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.62■■□□□ 1.37
PRICKLE1Q96MT3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.62■■□□□ 1.37
PRICKLE1Q96MT3 AL356740.2-201ENST00000601559 647 ntBASIC23.62■■□□□ 1.37
PRICKLE1Q96MT3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PRICKLE1Q96MT3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PRICKLE1Q96MT3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PRICKLE1Q96MT3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.62■■□□□ 1.37
PRICKLE1Q96MT3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PRICKLE1Q96MT3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.61■■□□□ 1.37
PRICKLE1Q96MT3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
PRICKLE1Q96MT3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PRICKLE1Q96MT3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.61■■□□□ 1.37
PRICKLE1Q96MT3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PRICKLE1Q96MT3 AL512631.2-201ENST00000604634 923 ntBASIC23.61■■□□□ 1.37
PRICKLE1Q96MT3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
PRICKLE1Q96MT3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.61■■□□□ 1.37
PRICKLE1Q96MT3 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.61■■□□□ 1.37
PRICKLE1Q96MT3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PRICKLE1Q96MT3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PRICKLE1Q96MT3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PRICKLE1Q96MT3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.6■■□□□ 1.37
PRICKLE1Q96MT3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PRICKLE1Q96MT3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PRICKLE1Q96MT3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.6■■□□□ 1.37
PRICKLE1Q96MT3 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.6■■□□□ 1.37
PRICKLE1Q96MT3 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.6■■□□□ 1.37
PRICKLE1Q96MT3 AC008406.3-201ENST00000620001 1374 ntBASIC23.6■■□□□ 1.37
PRICKLE1Q96MT3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PRICKLE1Q96MT3 AL161729.1-201ENST00000604104 1402 ntBASIC23.59■■□□□ 1.37
PRICKLE1Q96MT3 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.59■■□□□ 1.37
PRICKLE1Q96MT3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.59■■□□□ 1.37
PRICKLE1Q96MT3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.59■■□□□ 1.37
PRICKLE1Q96MT3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PRICKLE1Q96MT3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PRICKLE1Q96MT3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PRICKLE1Q96MT3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.59■■□□□ 1.37
PRICKLE1Q96MT3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PRICKLE1Q96MT3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PRICKLE1Q96MT3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms