Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC28.5■■■□□ 2.15
RPGRQ92834 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.5■■■□□ 2.15
RPGRQ92834 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RPGRQ92834 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.5■■■□□ 2.15
RPGRQ92834 C17orf82-201ENST00000623772 1530 ntBASIC28.49■■■□□ 2.15
RPGRQ92834 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
RPGRQ92834 IRS3P-201ENST00000223076 1006 ntBASIC28.49■■■□□ 2.15
RPGRQ92834 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC28.49■■■□□ 2.15
RPGRQ92834 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC28.49■■■□□ 2.15
RPGRQ92834 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
RPGRQ92834 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RPGRQ92834 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
RPGRQ92834 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC28.48■■■□□ 2.15
RPGRQ92834 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RPGRQ92834 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RPGRQ92834 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
RPGRQ92834 HES6-206ENST00000409574 738 ntTSL 2 BASIC28.48■■■□□ 2.15
RPGRQ92834 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC28.48■■■□□ 2.15
RPGRQ92834 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC28.48■■■□□ 2.15
RPGRQ92834 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC28.48■■■□□ 2.15
RPGRQ92834 MIR6089-201ENST00000616698 64 ntBASIC28.48■■■□□ 2.15
RPGRQ92834 AC241377.3-202ENST00000626088 1088 ntBASIC28.48■■■□□ 2.15
RPGRQ92834 AC241585.3-202ENST00000628937 1088 ntBASIC28.48■■■□□ 2.15
RPGRQ92834 AC245100.8-202ENST00000629247 1058 ntBASIC28.48■■■□□ 2.15
RPGRQ92834 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
RPGRQ92834 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.47■■■□□ 2.15
RPGRQ92834 AL162430.1-201ENST00000480705 870 ntBASIC28.47■■■□□ 2.15
RPGRQ92834 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
RPGRQ92834 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RPGRQ92834 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RPGRQ92834 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
RPGRQ92834 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
RPGRQ92834 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RPGRQ92834 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
RPGRQ92834 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
RPGRQ92834 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
RPGRQ92834 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
RPGRQ92834 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
RPGRQ92834 AC136469.2-201ENST00000623944 1028 ntBASIC28.46■■■□□ 2.15
RPGRQ92834 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
RPGRQ92834 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
RPGRQ92834 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC28.45■■■□□ 2.14
RPGRQ92834 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
RPGRQ92834 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
RPGRQ92834 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC28.44■■■□□ 2.14
RPGRQ92834 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RPGRQ92834 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RPGRQ92834 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.44■■■□□ 2.14
RPGRQ92834 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC28.44■■■□□ 2.14
RPGRQ92834 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RPGRQ92834 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RPGRQ92834 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC28.43■■■□□ 2.14
RPGRQ92834 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RPGRQ92834 AC006455.2-201ENST00000429931 906 ntBASIC28.43■■■□□ 2.14
RPGRQ92834 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC28.43■■■□□ 2.14
RPGRQ92834 RHOF-204ENST00000537265 699 ntTSL 2 BASIC28.43■■■□□ 2.14
RPGRQ92834 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC28.43■■■□□ 2.14
RPGRQ92834 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RPGRQ92834 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
RPGRQ92834 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
RPGRQ92834 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.43■■■□□ 2.14
RPGRQ92834 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC28.42■■■□□ 2.14
RPGRQ92834 GLI3-203ENST00000437480 451 ntTSL 2 BASIC28.42■■■□□ 2.14
RPGRQ92834 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC28.42■■■□□ 2.14
RPGRQ92834 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.42■■■□□ 2.14
RPGRQ92834 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
RPGRQ92834 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
RPGRQ92834 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.42■■■□□ 2.14
RPGRQ92834 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC28.41■■■□□ 2.14
RPGRQ92834 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC28.41■■■□□ 2.14
RPGRQ92834 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC28.41■■■□□ 2.14
RPGRQ92834 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.4■■■□□ 2.14
RPGRQ92834 AL121749.1-202ENST00000609313 2153 ntBASIC28.4■■■□□ 2.14
RPGRQ92834 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC28.4■■■□□ 2.14
RPGRQ92834 JTB-203ENST00000368589 1216 ntTSL 2 BASIC28.4■■■□□ 2.14
RPGRQ92834 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC28.4■■■□□ 2.14
RPGRQ92834 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC28.4■■■□□ 2.14
RPGRQ92834 AC009086.3-201ENST00000623486 1008 ntBASIC28.4■■■□□ 2.14
RPGRQ92834 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RPGRQ92834 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
RPGRQ92834 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
RPGRQ92834 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
RPGRQ92834 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
RPGRQ92834 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC28.39■■■□□ 2.14
RPGRQ92834 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
RPGRQ92834 AC233992.3-201ENST00000607491 485 ntBASIC28.39■■■□□ 2.14
RPGRQ92834 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
RPGRQ92834 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
RPGRQ92834 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
RPGRQ92834 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC28.38■■■□□ 2.13
RPGRQ92834 MIR3181-201ENST00000578512 73 ntBASIC28.38■■■□□ 2.13
RPGRQ92834 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC28.38■■■□□ 2.13
RPGRQ92834 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC28.37■■■□□ 2.13
RPGRQ92834 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RPGRQ92834 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RPGRQ92834 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.37■■■□□ 2.13
RPGRQ92834 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
RPGRQ92834 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
RPGRQ92834 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
RPGRQ92834 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms