Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF138Q8WVD3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
RNF138Q8WVD3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF138Q8WVD3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF138Q8WVD3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF138Q8WVD3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF138Q8WVD3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF138Q8WVD3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.9■□□□□ 0.94
RNF138Q8WVD3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF138Q8WVD3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF138Q8WVD3 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.89■□□□□ 0.93
RNF138Q8WVD3 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.89■□□□□ 0.93
RNF138Q8WVD3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF138Q8WVD3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.89■□□□□ 0.93
RNF138Q8WVD3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF138Q8WVD3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF138Q8WVD3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF138Q8WVD3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF138Q8WVD3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF138Q8WVD3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF138Q8WVD3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.88■□□□□ 0.93
RNF138Q8WVD3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF138Q8WVD3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF138Q8WVD3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.88■□□□□ 0.93
RNF138Q8WVD3 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.88■□□□□ 0.93
RNF138Q8WVD3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF138Q8WVD3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF138Q8WVD3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF138Q8WVD3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF138Q8WVD3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF138Q8WVD3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF138Q8WVD3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF138Q8WVD3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF138Q8WVD3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.87■□□□□ 0.93
RNF138Q8WVD3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RNF138Q8WVD3 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF138Q8WVD3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF138Q8WVD3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF138Q8WVD3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RNF138Q8WVD3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF138Q8WVD3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF138Q8WVD3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF138Q8WVD3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF138Q8WVD3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF138Q8WVD3 AC005703.6-201ENST00000623265 1329 ntBASIC20.85■□□□□ 0.93
RNF138Q8WVD3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF138Q8WVD3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF138Q8WVD3 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF138Q8WVD3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF138Q8WVD3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF138Q8WVD3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF138Q8WVD3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF138Q8WVD3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF138Q8WVD3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF138Q8WVD3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF138Q8WVD3 AL117332.1-201ENST00000622628 974 ntBASIC20.84■□□□□ 0.93
RNF138Q8WVD3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF138Q8WVD3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF138Q8WVD3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF138Q8WVD3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF138Q8WVD3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF138Q8WVD3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF138Q8WVD3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF138Q8WVD3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF138Q8WVD3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF138Q8WVD3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF138Q8WVD3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF138Q8WVD3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.83■□□□□ 0.93
RNF138Q8WVD3 MIR3621-201ENST00000580529 85 ntBASIC20.83■□□□□ 0.93
RNF138Q8WVD3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF138Q8WVD3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RNF138Q8WVD3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF138Q8WVD3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF138Q8WVD3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF138Q8WVD3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RNF138Q8WVD3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF138Q8WVD3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF138Q8WVD3 AC093323.1-202ENST00000635031 2045 ntBASIC20.82■□□□□ 0.92
RNF138Q8WVD3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF138Q8WVD3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF138Q8WVD3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF138Q8WVD3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF138Q8WVD3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF138Q8WVD3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF138Q8WVD3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RNF138Q8WVD3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF138Q8WVD3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF138Q8WVD3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.81■□□□□ 0.92
RNF138Q8WVD3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF138Q8WVD3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
RNF138Q8WVD3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF138Q8WVD3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RNF138Q8WVD3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RNF138Q8WVD3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF138Q8WVD3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF138Q8WVD3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF138Q8WVD3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF138Q8WVD3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF138Q8WVD3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF138Q8WVD3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms