Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 KRT18P60-201ENST00000312876 1297 ntBASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 LONRF2P2-201ENST00000439212 571 ntBASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 AC139795.1-202ENST00000500444 432 ntBASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 ABHD17AP5-201ENST00000580133 923 ntBASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MRPL55Q7Z7F7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
MRPL55Q7Z7F7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MRPL55Q7Z7F7 AL161729.1-201ENST00000604104 1402 ntBASIC14.6□□□□□ -0.07
MRPL55Q7Z7F7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MRPL55Q7Z7F7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
MRPL55Q7Z7F7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
MRPL55Q7Z7F7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MRPL55Q7Z7F7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MRPL55Q7Z7F7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MRPL55Q7Z7F7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MRPL55Q7Z7F7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MRPL55Q7Z7F7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
MRPL55Q7Z7F7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
MRPL55Q7Z7F7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MRPL55Q7Z7F7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MRPL55Q7Z7F7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
MRPL55Q7Z7F7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC14.59□□□□□ -0.07
MRPL55Q7Z7F7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
MRPL55Q7Z7F7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MRPL55Q7Z7F7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC14.59□□□□□ -0.07
MRPL55Q7Z7F7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MRPL55Q7Z7F7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MRPL55Q7Z7F7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MRPL55Q7Z7F7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MRPL55Q7Z7F7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC14.58□□□□□ -0.07
MRPL55Q7Z7F7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC14.58□□□□□ -0.07
MRPL55Q7Z7F7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC14.58□□□□□ -0.07
MRPL55Q7Z7F7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 AC011551.1-201ENST00000614101 683 ntBASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC14.58□□□□□ -0.08
MRPL55Q7Z7F7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 AC022616.5-201ENST00000518796 181 ntBASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 NTF6A-201ENST00000591175 560 ntBASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 DUSP8P5-201ENST00000422884 1815 ntBASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MRPL55Q7Z7F7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC14.56□□□□□ -0.08
MRPL55Q7Z7F7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms